Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_T7_D22
(787 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0673 - 5491694-5493102,5493386-5493995 31 0.79
02_03_0207 - 16421134-16421243,16421977-16422283 31 1.0
12_01_0913 + 8882193-8883510,8887633-8887865,8889619-8889871,889... 30 1.8
01_06_0527 - 30018814-30019638 30 1.8
04_03_0226 - 12977443-12977895 30 2.4
10_02_0063 - 4849637-4850640,4854341-4854596,4854666-4855340 29 3.2
01_06_0948 - 33242219-33242530,33242632-33242782,33242874-332431... 29 4.2
01_01_0761 - 5874953-5876803 29 5.5
12_02_1175 + 26702744-26704507 28 7.3
09_06_0196 - 21481662-21481720,21481898-21483245 28 7.3
06_01_1204 + 10397131-10398498 28 7.3
04_04_1299 + 32450998-32451134,32451575-32452304,32452856-324530... 28 7.3
04_04_0179 - 23342764-23342973,23343185-23343340,23343535-233435... 28 7.3
02_02_0631 - 12397517-12398452,12398693-12398819,12398971-123991... 28 7.3
01_01_0068 + 532786-533139 28 7.3
11_01_0422 + 3246528-3248606 28 9.7
07_03_0750 - 21226896-21227011,21227116-21227370,21227469-212287... 28 9.7
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 31.5 bits (68), Expect = 0.79
Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 5/65 (7%)
Frame = +1
Query: 418 WEGVDMSVHELHEVPSGYLRASLPNPL-----CGCRGACGFAKFASINRCMQMFSPKQAH 582
W + S E+H P L A P+P CG G C CM+ FS K
Sbjct: 214 WSQANQSWAEVHAEPWAQLYAQPPDPCTPFATCGPFGICN-GNSEQFCDCMESFSQKSPQ 272
Query: 583 RWSLR 597
W L+
Sbjct: 273 DWKLK 277
>02_03_0207 - 16421134-16421243,16421977-16422283
Length = 138
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +1
Query: 364 GQRRLTPTSTPSRSANAGWEGVDMSVHELHEVPSGYLRASLP-NPLCGCRGACGFAKFAS 540
G R + PT TPS +A A W VP+ L P + G AC ++K
Sbjct: 65 GTREVAPTVTPSPAAKAVWREPACEARMREAVPTVALSGHAPFEGVLGKNPAC-YSKIGD 123
Query: 541 INRC 552
I+ C
Sbjct: 124 IDAC 127
>12_01_0913 +
8882193-8883510,8887633-8887865,8889619-8889871,
8891281-8891470,8891641-8891773,8891797-8891886
Length = 738
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 499 CGCRGACGF-AKFASINRCMQMFSPKQAHRWSLR 597
CG G C A SI RC++ FSP WS+R
Sbjct: 311 CGAFGLCDSNAGATSICRCVKGFSPASPAEWSMR 344
>01_06_0527 - 30018814-30019638
Length = 274
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
Frame = -3
Query: 617 SAVLTPQRNDHLCACFGENICMHLLMDAN--FANPHAPRHPQSGLGSDARR*PDGTSCSS 444
SA L P+ + AC+G + +L DAN F + H +G S+ P ++
Sbjct: 69 SAPLDPRVVAAIKACYGLGCDLRILSDANRFFIDTILDHHGLTGYFSEINTNPSAVDAAT 128
Query: 443 CTLISTPSHPAFADREGVEVGV 378
L P H A G +G+
Sbjct: 129 GRLRIAPYHDFHAGPHGCGLGI 150
>04_03_0226 - 12977443-12977895
Length = 150
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/73 (31%), Positives = 27/73 (36%), Gaps = 5/73 (6%)
Frame = -3
Query: 314 SVTEHTAAGFYDTTRLYLSWRKPWKRTSGRLSWSRGYEHRLVSV-----SRILSPPGMVS 150
SVTE A T R WR+ W+ R SW+ RL G +
Sbjct: 47 SVTEAAVASVLMTWRRGSQWRRTWRGCQRRRSWAWRRRWRLGRADVEPGGGCGGQEGRIH 106
Query: 149 E*SWTCRWSRASD 111
E SWT R A D
Sbjct: 107 EGSWTMREEAAVD 119
>10_02_0063 - 4849637-4850640,4854341-4854596,4854666-4855340
Length = 644
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 618 TCGAVXGPPQFLTNLIRFGGGSC 686
TCG G P+F TN GGG C
Sbjct: 191 TCGVRLGQPEFATNGSCLGGGCC 213
>01_06_0948 -
33242219-33242530,33242632-33242782,33242874-33243111,
33243196-33243298,33243323-33243406,33243640-33243815,
33243943-33244074,33248406-33248967,33249084-33249842
Length = 838
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 499 CGCRGACGFAKFASINRCMQMFSPKQAHRWSLRCG 603
CG G C + C++ F+PK W+LR G
Sbjct: 303 CGANGVCDTNNLP-VCSCLRGFTPKSPEAWALRDG 336
>01_01_0761 - 5874953-5876803
Length = 616
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -3
Query: 695 WSVARAAAKSDKIRKKLRWAXNSSAGSAVLTPQRNDHLCACFGENICMHLLMDANFANPH 516
WSV++ K L A NSS + L ND + N+ +HL H
Sbjct: 158 WSVSKDVTKY----ASLLAARNSSTLAVYLANLVNDQYTGVYHANVTLHLYF------RH 207
Query: 515 APRHPQSGLG 486
P+ PQ GLG
Sbjct: 208 PPQPPQPGLG 217
>12_02_1175 + 26702744-26704507
Length = 587
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 586 WSLRCGVNTAEPAELXQAHRSFLRILSDLAAALATDHGDESSPPKTP 726
W+ C N ++ E+ + SDLAA L D++SPP P
Sbjct: 275 WTSHCCANASDELEVDDTKQP----TSDLAAPLLVVDDDDASPPPLP 317
>09_06_0196 - 21481662-21481720,21481898-21483245
Length = 468
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 499 CGCRGACGFAKFASINRCMQMFSPKQAHRWS 591
CG G C +++ A C+ F P+ WS
Sbjct: 304 CGPYGYCYYSEVAPTCECLDGFEPRSKEEWS 334
>06_01_1204 + 10397131-10398498
Length = 455
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 177 PAYGDQPMFVASAPAQPSTCSLPWLSPRKIQSCCVVESGRR 299
P + P+ A PA+ S LPWL + +S V G R
Sbjct: 222 PVFAVGPLSPAPIPAKDSGSYLPWLDAQPARSVVYVSFGSR 262
>04_04_1299 +
32450998-32451134,32451575-32452304,32452856-32453053,
32453398-32454065,32454555-32454978,32455917-32456009,
32456101-32456295,32456378-32456470,32456718-32456930,
32457015-32457104,32457239-32457400
Length = 1000
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 301 CSVTLL*DVSRRLPNLATSTAGQR 372
C V L SRR PN+A +T+GQR
Sbjct: 881 CEVYTLLGRSRRFPNMAHATSGQR 904
>04_04_0179 - 23342764-23342973,23343185-23343340,23343535-23343593,
23344150-23344226,23344309-23344587,23344800-23344885,
23344960-23345027,23345721-23345904,23346071-23346204,
23346776-23347039,23347613-23347677,23347833-23348407,
23348501-23348680,23348765-23348928,23349008-23349261,
23349405-23349562,23349808-23349948,23350176-23350282,
23350651-23350737,23350812-23350901,23350974-23351055,
23351370-23351561,23351748-23351816,23351959-23352294,
23352694-23352837,23352963-23353126,23353817-23353883
Length = 1463
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = -3
Query: 602 PQRNDHLCACFGENICMHLLMDANFANPHAPRHPQSG 492
P+ HLC+ N C+ L ++ A HA H G
Sbjct: 1358 PRGASHLCSLLAGNCCLRLTLEDPTARIHAYIHKDDG 1394
>02_02_0631 -
12397517-12398452,12398693-12398819,12398971-12399154,
12399303-12399395,12400029-12400077,12400565-12400624,
12400689-12400730,12400840-12400992,12401075-12401206,
12401313-12401408,12401936-12402079,12402234-12402308,
12403896-12404021
Length = 738
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +1
Query: 565 SPKQAHRWSLRCGVNTAEPAELXQAHR--SFLRILSDLAAAL----ATDHGDESSPPKTP 726
SPK S R +T EPA H + L LA A+ + DE+SP TP
Sbjct: 522 SPKSCQSESQRSDSSTEEPANGKSRHHLHKVKKGLGKLAGAMFKSPKKESDDEASPCVTP 581
Query: 727 HXEVR 741
H ++
Sbjct: 582 HPNIK 586
>01_01_0068 + 532786-533139
Length = 117
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 289 PAAVCSVTL-L*DVSRRLPNLATSTAGQRRLTPTSTP 396
P A+ +L L + RRLP+LAT+++G R +S+P
Sbjct: 39 PMAMAGASLPLPSLVRRLPDLATASSGDPREVASSSP 75
>11_01_0422 + 3246528-3248606
Length = 692
Score = 27.9 bits (59), Expect = 9.7
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +1
Query: 502 GCRGACGFAKFASINRC--MQMFSPKQAHRWSLRCGVNTAEPAELXQAHRSFLRILSDLA 675
GC A G A F + RC +QM + +A + R + ++ +A R ++
Sbjct: 334 GCDAAVGRAIFVDLARCAMLQMLNFTEAVAMTKRAAEKLFKVLDMYEAVRDAAPVIDAFI 393
Query: 676 AALATDHGDESSPPKT 723
AA +T P T
Sbjct: 394 AACSTTDAAADEPDTT 409
>07_03_0750 -
21226896-21227011,21227116-21227370,21227469-21228785,
21228918-21228984
Length = 584
Score = 27.9 bits (59), Expect = 9.7
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Frame = -3
Query: 785 QDGGLAIPXGASDHXRTSX*GVFGGL--DSSPWSVARAAAKSDKIRKKLRWAXNSSAGSA 612
Q+ GL P G + G G + + W VA +A S +++ L WA ++ A
Sbjct: 352 QNFGLFYPDGTEVYQVDFHNGGGGNVCPTKASWCVANSAVGSTRLQAALDWACSNGADCG 411
Query: 611 VLTPQRNDHLCACFGENICMHLLMDANFA-NPHAPRHPQS 495
+ P + CF N L+ A++A N + R Q+
Sbjct: 412 AIQPGK-----TCFAPNT---LVAHASYAFNDYYQRKSQA 443
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,893,701
Number of Sequences: 37544
Number of extensions: 556403
Number of successful extensions: 1929
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1926
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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