Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_D22
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   3.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   3.2  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   5.6  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   7.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   7.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -3

Query: 308 TEHTAAGFYDTTRLYLSWRKPWKRTSGRLSWSRGYEHRLVSVSRILSPPGMVSE*SW-TC 132
           +EH     Y   ++   W       +  L W+RG +   +S   +   PGM+ +    TC
Sbjct: 408 SEHNGTNGYQY-QVVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIKKQQGDTC 466

Query: 131 RW 126
            W
Sbjct: 467 CW 468


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -3

Query: 308 TEHTAAGFYDTTRLYLSWRKPWKRTSGRLSWSRGYEHRLVSVSRILSPPGMVSE*SW-TC 132
           +EH     Y   ++   W       +  L W+RG +   +S   +   PGM+ +    TC
Sbjct: 498 SEHNGTNGYQY-QVVGKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIKKQQGDTC 556

Query: 131 RW 126
            W
Sbjct: 557 CW 558


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 285 ESGRRVFCDTVVGCE 329
           E    +FC+T +GC+
Sbjct: 157 EVANEMFCETTIGCK 171


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 231 WTVELEPRLRTSVGLRK 181
           WT+E  PR++T +G  K
Sbjct: 17  WTLEDAPRVKTPLGAIK 33


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 231 WTVELEPRLRTSVGLRK 181
           WT+E  PR++T +G  K
Sbjct: 17  WTLEDAPRVKTPLGAIK 33


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 268  CIFRGESHGREQVD 227
            C+ RG+ HG ++ D
Sbjct: 1606 CVLRGKGHGSDKDD 1619


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,742
Number of Sequences: 438
Number of extensions: 4705
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)