Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_D17
         (772 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U91326-1|AAC27674.1|  913|Homo sapiens eIF-3 p110 subunit protein.     43   0.001
U46025-1|AAD03462.1|  913|Homo sapiens translation intiation fac...    43   0.001
BT007335-1|AAP35999.1|  325|Homo sapiens eukaryotic translation ...    43   0.001
BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation ...    43   0.001
BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation ...    43   0.001
BC000533-1|AAH00533.1|  325|Homo sapiens EIF3S8 protein protein.       43   0.001
AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing...    43   0.001
AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens ...    43   0.001
AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation ...    43   0.001

>U91326-1|AAC27674.1|  913|Homo sapiens eIF-3 p110 subunit protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>U46025-1|AAD03462.1|  913|Homo sapiens translation intiation factor
           eIF-3 p110 subunit protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>BT007335-1|AAP35999.1|  325|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 8, 110kDa protein.
          Length = 325

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 231 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 262


>BC071705-1|AAH71705.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit C protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>BC001571-1|AAH01571.1|  913|Homo sapiens eukaryotic translation
           initiation factor 3, subunit 8, 110kDa protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>BC000533-1|AAH00533.1|  325|Homo sapiens EIF3S8 protein protein.
          Length = 325

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 231 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 262


>AY762099-1|AAX07826.1|  913|Homo sapiens cell migration-inducing
           protein 17 protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>AK000739-1|BAA91352.1|  913|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20732 fis, clone HEP08682. ).
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


>AC002544-1|AAC27426.1|  913|Homo sapiens Translation initiation
           factor eIF-p110 protein.
          Length = 913

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -1

Query: 751 HFLVXXMIINEELLASLDDPSECXILXRSEPT 656
           H ++  MIINEEL+ASLD P++  ++ R+EPT
Sbjct: 819 HSIISKMIINEELMASLDQPTQTVVMHRTEPT 850


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,181,494
Number of Sequences: 237096
Number of extensions: 1268103
Number of successful extensions: 1788
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1788
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)