Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_C22
         (780 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    33   0.34 
06_03_0478 - 21259376-21259465,21259862-21259924,21260025-212600...    31   0.78 
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458...    31   1.0  
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373...    29   3.1  
07_03_0626 + 20060013-20060273,20061017-20061274                       29   5.5  
07_03_0414 + 17892133-17893590                                         28   7.2  
01_06_0695 - 31292622-31293317                                         28   7.2  
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047...    28   9.6  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 81  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 209
           PS TP  ER  S+D   PR     Y   R+RD    K+  S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407


>06_03_0478 - 21259376-21259465,21259862-21259924,21260025-21260066,
            21260180-21260461,21261084-21261587,21261973-21261981,
            21262122-21262196,21262375-21262449,21262557-21263494,
            21263577-21263607,21263694-21263979,21264691-21264905,
            21265329-21265437,21265556-21265611,21265730-21265822,
            21266348-21266393,21266496-21267221,21267489-21267550,
            21267738-21268013,21268604-21268735,21268835-21268909
          Length = 1394

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +3

Query: 45   ESSXDQQRDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 209
            + S DQ+ D+   S T  +E+K S +   P+H   +    RS+D++V+  + S+D
Sbjct: 972  KKSRDQKTDSKQKSLTDTKEKKKSDE--PPKHPGFILQAKRSKDSKVRSTSLSLD 1024


>08_01_0527 +
           4580599-4580818,4580933-4581806,4581891-4581955,
           4582055-4582110,4582955-4583058,4583310-4583382,
           4583474-4583654,4584537-4584622
          Length = 552

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 60  QQRDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGL 230
           QQRD + P    R + K S D S PR RT  +     +D    ++    D  +P  L
Sbjct: 205 QQRDPSPPRRLSRHDSKESQDISPPRRRTR-HDSEEPQDLSPPRRKGRHDSEEPKDL 260


>06_03_1055 -
           27234824-27234838,27236087-27236125,27236322-27237388,
           27237422-27237630,27237650-27238053
          Length = 577

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = -3

Query: 349 ASLAESGKDMLTVEPRESGGSXQCDFTSRVSHSKRETRRRSPFGS 215
           A+ A +GK +   E  E   S QCD T  + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473


>07_03_0626 + 20060013-20060273,20061017-20061274
          Length = 172

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 337 RLGWLRPXRRSGIIP 381
           RLGWLRP R S ++P
Sbjct: 32  RLGWLRPSRLSAVVP 46


>07_03_0414 + 17892133-17893590
          Length = 485

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
 Frame = +2

Query: 428 QMSETAVPLVLSSITIATTSHQ*GKTNLSHDGLIPAHVPF*WVNNPXL-GEFCFAXIGRA 604
           Q   + V + L S+T+ +       T   H GL+ A  PF WV  P + G    A +  A
Sbjct: 279 QADGSVVYVSLGSLTVISLEQF---TEFLH-GLVAAGYPFLWVLRPDMVGASQSAALREA 334

Query: 605 DIEGSKSNVAMNAWLPQ 655
                KS   +  W PQ
Sbjct: 335 VAAAGKSKARVVEWAPQ 351


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 63  QRDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 167
           Q+D   PS++      SST  S P HR  L P  R
Sbjct: 13  QQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


>08_02_1508 +
           27602104-27602265,27602398-27602449,27603357-27604757,
           27604833-27606140,27606594-27607435
          Length = 1254

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = +3

Query: 33  SAGTES-SXDQQRDAALPSTTPRQERKSSTDYSEPRHRTELYPDL-RSRDARVKKKTDS 203
           SAG  S S   QR+  LPS T RQ++ S    S     TE  P   RSR    +K+  S
Sbjct: 267 SAGMISTSFSSQREQPLPSETIRQDKPSPRKESNFFTTTEKTPSTPRSRAPTTQKQPSS 325


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,760,057
Number of Sequences: 37544
Number of extensions: 393477
Number of successful extensions: 992
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)