Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_C02
         (954 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB...    29   7.1  
AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA...    29   7.1  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    29   9.4  

>AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB,
           isoform B protein.
          Length = 872

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 530 PCHGR*GFRPLIFK*MMNHKLRALLVVIPRIL 435
           PC  R  F PLIF  +  H+L  L+V IP ++
Sbjct: 252 PCFYRMIFHPLIFFTLFYHRLLNLIVSIPNVI 283


>AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA,
           isoform A protein.
          Length = 853

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 530 PCHGR*GFRPLIFK*MMNHKLRALLVVIPRIL 435
           PC  R  F PLIF  +  H+L  L+V IP ++
Sbjct: 233 PCFYRMIFHPLIFFTLFYHRLLNLIVSIPNVI 264


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 29.1 bits (62), Expect = 9.4
 Identities = 17/67 (25%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
 Frame = -2

Query: 245  PFDTVLYDNIRTVLKDNKTVLLSASIQASL-PSSEIYRQLVDPRHVSSDSFGVYVKS*SL 69
            P D++  +N+ +VL DNKT+ L+   + ++ P+ +I   + +P ++ + S     ++  +
Sbjct: 2336 PVDSIWIENLNSVLDDNKTLTLANGDRLTMAPTVKI---IFEPHNIDNASPATVSRNGMV 2392

Query: 68   ILHSFGL 48
             + S GL
Sbjct: 2393 YMSSSGL 2399


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,362,363
Number of Sequences: 53049
Number of extensions: 426303
Number of successful extensions: 950
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)