Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_T7_B08
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    27   0.27 
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    24   1.9  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    24   1.9  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 521 WPPTSRPRRLCLGKILSVHPFSLSKFREGNSFPGRPSI 634
           WP TS+ +R     I S  PF +++  +  SFP R S+
Sbjct: 590 WPSTSQIQRGVNAAIRSQEPFYITEPHQIFSFPARLSL 627


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 314 LNGQLRSVFIRDENASKEMKIHPKAVKGDKNQV 216
           L+GQ R  F +DE     MK    A K  KN V
Sbjct: 54  LDGQFRGEFPQDERLMCYMKCIMIATKAMKNDV 86


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -1

Query: 314 LNGQLRSVFIRDENASKEMKIHPKAVKGDKNQV 216
           L+GQ R  F +DE     MK    A K  KN V
Sbjct: 28  LDGQFRGEFPQDERLMCYMKCIMIATKAMKNDV 60


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,369
Number of Sequences: 438
Number of extensions: 3996
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)