Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_P24
(847 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0610 - 25449085-25453284 35 0.071
06_03_1310 + 29238644-29240260 32 0.66
05_07_0228 - 28526885-28527046,28527151-28527241,28528315-285284... 31 0.87
03_05_0263 + 22503943-22506240 31 0.87
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 31 0.87
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 30 2.7
02_04_0452 + 23044190-23045227 29 3.5
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.5
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 29 4.7
05_07_0240 + 28606345-28607316 29 4.7
08_02_0875 + 22103903-22106293 29 6.2
04_01_0041 - 464695-464850,467485-469029 29 6.2
01_05_0227 - 19512866-19514983 29 6.2
11_06_0061 - 19702893-19703869,19703960-19704098,19704166-197042... 28 8.1
04_03_0806 + 19857675-19859135 28 8.1
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 8.1
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 35.1 bits (77), Expect = 0.071
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPRXAXTXRSSPP 665
PPSPA S +P HTP + S P + T +SSPP
Sbjct: 933 PPSPAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSPTPKSSPP 976
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLTSIS-INPRXAXTXRSSPP 665
PP+P A+S P HTP+ P+ T S +P + SSPP
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPP 662
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 534 PPSPAISATSTRSSNPRFHTPTTPDLT-SISINPRXAXTXRSSPP 665
PP+P A+S P HTP+ P T +P + SSPP
Sbjct: 651 PPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPESESSSPP 695
>06_03_1310 + 29238644-29240260
Length = 538
Score = 31.9 bits (69), Expect = 0.66
Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Frame = +1
Query: 514 SRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HP--FPSIPGTPXLXGVRRRGLKPPLS 687
S P +SS PP P + +P PP T P +PGTP PP
Sbjct: 437 SPPSSSSSPPTE----HPGYVLPPLTPPPPTTTPPGHHAPVPGTPS--SPPSSSWSPPQG 490
Query: 688 SEGSISVSHPLVXGAWLKGFRPPYFPVXDXLMXPPLSRLXXSSXP 822
G + P V G PP P D L PP+ + SS P
Sbjct: 491 GGGKLPF--PPVHGVAYSSPPPP--PSGDKLPFPPVYGVAYSSPP 531
Score = 29.9 bits (64), Expect = 2.7
Identities = 27/94 (28%), Positives = 35/94 (37%)
Frame = +1
Query: 475 AGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIPGTPXLXG 654
A HPF S ++ P + P R+ L H+ P H PP+ P P P +P
Sbjct: 351 AAHPFDCSKAQCQATPPTTRRPGGRTPL--APHRSPLPHHMPPRRTPPTPPPPSSPTPSH 408
Query: 655 VRRRGLKPPLSSEGSISVSHPLVXGAWLKGFRPP 756
+ PP SE S P G PP
Sbjct: 409 LPP---PPPTYSESPKSSMPPSTSPPSSHGASPP 439
>05_07_0228 -
28526885-28527046,28527151-28527241,28528315-28528455,
28528560-28528625,28529180-28529317,28529759-28529860,
28530156-28530236,28530314-28530383,28530598-28530674,
28531035-28531483
Length = 458
Score = 31.5 bits (68), Expect = 0.87
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +3
Query: 615 SISINPRXAXTXRSSPPGVKASVVIRGLHQRISP 716
SIS +P A T SPPG VV+R Q SP
Sbjct: 42 SISTHPTNAATPNPSPPGASIVVVVRPAMQPASP 75
>03_05_0263 + 22503943-22506240
Length = 765
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINPRXAXTXRSSPPGVKA 677
PSP ++A S+R N PD+ + +N A T ++ P G+ A
Sbjct: 476 PSPVVAAFSSRGPNMLTPEILKPDIIAPGVNILAAWTGKAGPTGIAA 522
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 31.5 bits (68), Expect = 0.87
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 546 AISATSTRSSNPRFHTPTTP 605
A S+T+TR S PR H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +3
Query: 528 IKPPSPAISATSTR-SSNPR--FHTPTTPDLTSISINP 632
I PPSPA + S+R S +PR F TP T T+ S +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSP 62
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +1
Query: 481 HPFILSHYYWRSRPYASSHPPLRSRLHQPDHQIPDSIHQPP 603
H +L H+ +A SH SR H P + P S PP
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPTSAPPPP 206
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 284 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 457
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 458 VEGVNVLATPSSSRITIGGLALMHQ 532
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 591 TPTTPDLTSISINPRXAXTXRSSPPGVKASVVIRGLHQRISPPRXWGMAKGVSPP 755
+P D ++P R P K S V G H +SPPR + SPP
Sbjct: 159 SPDPRDAAGKDLSPPRQRRRRQDTPSPKGSEVAGG-HDDLSPPRKSRQQRDPSPP 212
>05_07_0240 + 28606345-28607316
Length = 323
Score = 29.1 bits (62), Expect = 4.7
Identities = 22/75 (29%), Positives = 30/75 (40%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINPRXAXTXRSSPPGVKASVVIRGLHQRISP 716
P+PA +A S+RSS + P + D + S PR T P V H R +
Sbjct: 28 PTPAAAAASSRSSRSK-KPPHSSD-PNQSKKPRLTLTVPGRPLSADGEVAAAIQHLRAAD 85
Query: 717 PRXWGMAKGVSPPLF 761
P + PP F
Sbjct: 86 PALATVIDAHDPPAF 100
>08_02_0875 + 22103903-22106293
Length = 796
Score = 28.7 bits (61), Expect = 6.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 537 PSPAISATSTRSSNPRFHTPTTPDLTSISINPRXAXTXRSSPPGV 671
P+P ++A S R NP+ PDL + +N A P G+
Sbjct: 506 PAPVVAAFSARGPNPQSPEILKPDLIAPGLNILAAWPSGVGPAGI 550
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 245 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 421
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 422 TVD 430
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 6.2
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 462 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 370
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>11_06_0061 -
19702893-19703869,19703960-19704098,19704166-19704287,
19704362-19704416,19704508-19704624,19704718-19705413,
19706358-19706393,19707190-19708236
Length = 1062
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 622 PSIPGTPXLXGVRRRGLKPPLSSEGSISVSHPLVXGAWLKGFRPPYFP 765
P + G G RR +PP S+ S S P G ++G +PP P
Sbjct: 7 PPLTGRRRGRGRVRRWTRPPKGSQCSSSPRSPRPGGGGVEGEQPPLAP 54
>04_03_0806 + 19857675-19859135
Length = 486
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 563 NPIIKSPIPYTNHPRLNIHFHQSPXRR 643
NP + P PY + PRL +H H+ RR
Sbjct: 6 NPPLPLPPPYDSLPRLLLHHHRRLPRR 32
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +2
Query: 236 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 416 PVTVDLCWTTADVTVEGVNVLATPSS 493
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,367,468
Number of Sequences: 37544
Number of extensions: 535951
Number of successful extensions: 1536
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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