Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_P10
(742 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.005
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 0.060
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 32 0.099
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 0.12
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.13
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.70
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.70
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 23 1.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 3.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 3.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.5
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.003
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = -1
Query: 724 PXPPPPPPXXXXKKKKXXXPPPPPPPPXXXXKKK 623
P PPPPPP + PPPPPPP K+K
Sbjct: 9 PPPPPPPPGFEPPSQ-----PPPPPPPGYVKKRK 37
Score = 35.5 bits (78), Expect = 0.008
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPPPPPPPPXXXXKKK 624
PPPPPP + PPPPPPP K+K
Sbjct: 9 PPPPPPPPGFEPPSQ---PPPPPPPGYVKKRK 37
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 668 PPPPPPPPXXXXKKKXXXXPXXXXXKKK 585
PPPPPPPP + P KK+
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXP 666
PPPPPP KK+K P
Sbjct: 24 PPPPPPPGYVKKRKNKTP 41
Score = 27.9 bits (59), Expect = 1.6
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 718 PPPPPPXXXXKKKKXXXP 665
PPPPPP KK+K P
Sbjct: 24 PPPPPPPGYVKKRKNKTP 41
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 7 GNPPPPPPPP 16
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 668 PPPPPPPPXXXXKKKXXXXPXXXXXKKK 585
PPPPPPP + P K+K
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = -1
Query: 724 PXPPPPPPXXXXKKKKXXXPPPPPPPP 644
P PPPPPP PPPPPPPP
Sbjct: 761 PPPPPPPPGVAGA----GPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.019
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPPPPPPPP 645
PPPPPP PPPPPPPP
Sbjct: 761 PPPPPPPPGV---AGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPPPPPPPP 645
PPPPPP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 28.3 bits (60), Expect = 1.2
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 718 PPPPPPXXXXKKKKXXXPPPPPPPP 644
PPPPPP P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = -1
Query: 724 PXPPPPP-PXXXXKKKKXXXPPPPPPP 647
P P P P P PPPPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 724 PXPPPPPPXXXXKKKKXXXPPPPPPP 647
P PPPPPP + P P P
Sbjct: 776 PPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 716 PPPPPXXXXKKKKXXXPPPPPPPP 645
P P P PPPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 715 PPPPPXXXXKKKKXXXPPPPPPPP 644
P P P PPPPPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 25.4 bits (53), Expect = 8.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 716 PPPPPXXXXKKKKXXXPPPPPPP 648
P P P PPPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPP 768
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 759 GGPPPPPPPP 768
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 772 GAGPPPPPPP 781
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 774 GPPPPPPPPP 783
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
Score = 25.8 bits (54), Expect(2) = 0.060
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -2
Query: 723 PPPPPPPXXXXXKKKN 676
PPPPPPP K N
Sbjct: 308 PPPPPPPSNDFWKDSN 323
Score = 25.4 bits (53), Expect = 8.6
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 303 GGLPPPPPPP 312
Score = 25.4 bits (53), Expect(2) = 0.060
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 732 GXXPPPPPPP 703
G PPPPPPP
Sbjct: 304 GLPPPPPPPP 313
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 31.9 bits (69), Expect = 0.099
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -3
Query: 713 PPPPXXXXKKKKXXXPPPPPPPPXXXXKK 627
P P K PPPPPPPP KK
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPPAEVEKK 1108
Score = 31.9 bits (69), Expect = 0.099
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 712 PPPPXXXXKKKKXXXPPPPPPPPXXXXKK 626
P P K PPPPPPPP KK
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPPAEVEKK 1108
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 716 PPPPPXXXXKKKKXXXPPPPPPP 648
P P K PPPPPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPPP 1102
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 664 PPPPPPPXXXXKKK 623
PPPPPPP +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 724 PXPPPPPPXXXXKK 683
P PPPPPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.6 bits (56), Expect(2) = 0.12
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 0.12
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 724 PXPPPPPP 701
P PPPPPP
Sbjct: 905 PTPPPPPP 912
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPP-----PPPPPP 645
PPPPPP PP PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 7/32 (21%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXP-------PPPPPPP 645
PPPPPP + K PPPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.5 bits (63), Expect = 0.53
Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 7/32 (21%)
Frame = -1
Query: 718 PPPPPPXXXXKKKKXXXP-------PPPPPPP 644
PPPPPP + K PPPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 7/32 (21%)
Frame = -1
Query: 724 PXPPPP-------PPXXXXKKKKXXXPPPPPP 650
P PPPP PP PPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = -1
Query: 718 PPPPPPXXXXKKKKXXXP----PPPPPPP 644
PPPPPP P PPPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.9 bits (59), Expect = 1.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 724 PXPPPPPPXXXXKKKKXXXPPPPPPPPXXXXKKK 623
P PPP PPPPPPP + K
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK 324
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXP---PPPPPPPXXXXKKK 624
PP PPP PPPPPPP + K
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGK 324
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.70
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Frame = -1
Query: 724 PXPPPPP---PXXXXKKKKXXXPPPPPPPP 644
P PPPPP P PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -3
Query: 716 PPPPPXXXXKKKKXXXPPPPPPPP 645
P PP K+ PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 715 PPPPPXXXXKKKKXXXPPPPPPPP 644
P PP K+ PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -3
Query: 716 PPPPPXXXXKKKKXXXPPPPPPPP 645
PP PPPPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 715 PPPPPXXXXKKKKXXXPPPPPPPP 644
PP PPPPPPPP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPP 196
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPPPPPPP 648
P PP + PPPPPPP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPP 244
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 724 PXPPPPPP 701
P PPPPPP
Sbjct: 3 PAPPPPPP 10
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPP P
Sbjct: 5 PPPPPPAP 12
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 719 PPPPPPXXXXKKKKXXXPPPPPPPP 645
PP PPP K PP PPP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 718 PPPPPPXXXXKKKKXXXPPPPPPPP 644
PP PPP K PP PPP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 668 PPPPPPPP 645
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 667 PPPPPPPP 644
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 645 GGGGGGGGXXXFFFFXXXXGGGGGGXG 725
G GG GGG F GGG GG G
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 645 GGGGGGGGXXXFFFFXXXXGGGGGGXG 725
G GG GGG F GGG GG G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFG 262
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 645 GGGGGGGGXXXFFFFXXXXGGGGGGXG 725
G GG GGG F GGG GG G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,491,135
Number of Sequences: 5004
Number of extensions: 22266
Number of successful extensions: 511
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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