Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_P06
(842 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0582 + 17528335-17529790,17529913-17531651,17531814-175320... 39 0.006
10_01_0138 + 1657028-1657489 33 0.28
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 32 0.66
05_07_0071 - 27481876-27482737,27484328-27484950 31 1.1
03_05_0674 + 26619579-26619658,26620020-26620746,26620999-266214... 31 1.1
07_03_1257 - 25241194-25242018 31 1.5
07_03_0183 - 14822973-14823139,14823232-14823627,14823861-148240... 31 1.5
08_01_0718 - 6365506-6366047,6381623-6381937,6382857-6383082,638... 30 2.0
06_03_1037 - 27058002-27058082,27058856-27059041,27060033-270601... 30 2.0
06_01_0889 - 6807449-6809257 30 2.7
04_04_1210 + 31761689-31762255,31762318-31762322,31763009-317631... 30 2.7
03_04_0088 + 17209568-17209876,17209966-17210595,17210846-172110... 30 2.7
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416 29 3.5
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 29 6.1
09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420 29 6.1
02_01_0709 + 5315119-5315194,5316068-5316303,5316426-5316578,531... 29 6.1
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 28 8.1
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 28 8.1
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 28 8.1
04_04_0174 + 23305163-23305271,23305372-23305430,23305567-23305830 28 8.1
02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805 28 8.1
02_02_0317 + 8893593-8894207 28 8.1
>04_03_0582 + 17528335-17529790,17529913-17531651,17531814-17532035,
17532062-17533525
Length = 1626
Score = 38.7 bits (86), Expect = 0.006
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Frame = +3
Query: 213 GVGHSLEE-METYWRPILERVSDA-PGPTPEALHALGRAEWHGGNRDYTQLWKPISVEEI 386
G HS+ +ET + V A P PE++ L + + + +L + EEI
Sbjct: 839 GAIHSMTSVLETMATEYFQEVYKADPSLNPESVTRLFQEKVTDAMNE--KLCQEFKEEEI 896
Query: 387 KASRFDWRT--SPGPDGIRSGQWRAVPVHLKAEMFNA---WMARGEIPEILRQCRTVFVP 551
+ F SPGPDG + ++ LK+++ A + G +PE + V +P
Sbjct: 897 AQAIFQIGPLKSPGPDGFPARFYQRNWGTLKSDIILAVRNFFQSGLMPEGVNDTAIVLIP 956
Query: 552 KVERPGGPGEYRPISITSIPLRHFHSILARRL 647
K ++P +YRPIS+ ++ + L RL
Sbjct: 957 KKDQPIDLKDYRPISLCNVVYKVVSKCLVNRL 988
>10_01_0138 + 1657028-1657489
Length = 153
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +3
Query: 204 ACGGVGHSLEEMETYWRPILERVSDAPGPTPEALHALGRAEWHGG 338
A G GH + +E +R + E VS P LHAL R +HGG
Sbjct: 93 ARGEEGHDV--VEDSFREVAEPVSTGGAPRGRGLHALARRSFHGG 135
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 31.9 bits (69), Expect = 0.66
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = +3
Query: 414 SPGPDGIRSGQWRAVPVHLKAEMFNAWMAR---GEIP-EILRQCRTVFVPKVERPGGPGE 581
+PGPDG +G + H+ A+ + +A G + EIL VPK +
Sbjct: 329 APGPDGF-NGFFMKKCWHIIAQDYYRLVAHFHAGNVDLEILNSSFITLVPKKTSLETVND 387
Query: 582 YRPISITSIPLRHFHSILARRL 647
+RPIS+ I L+ +LA RL
Sbjct: 388 FRPISLMGISLKIVTKLLAGRL 409
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 779 LDFAKAFDTVSHEALVN 829
LDF KAFDT+ H A+++
Sbjct: 456 LDFEKAFDTIEHSAILS 472
>05_07_0071 - 27481876-27482737,27484328-27484950
Length = 494
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 9/57 (15%)
Frame = -3
Query: 483 TFPPSSAQEPHATDPNVYRPGPAKFAS---------QSGRP*SLPPRSASTAGCSRD 340
T P++A P P V+RPG +K S +S P SL S+STA CS D
Sbjct: 150 TASPAAAPSPAVAPPRVFRPGDSKTWSPIPCSSETCKSTIPFSLANCSSSTAACSYD 206
>03_05_0674 +
26619579-26619658,26620020-26620746,26620999-26621486,
26621746-26621902,26621975-26621998
Length = 491
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3
Query: 243 SPSPRASVRHPHTRHRSPQLLL 178
+PSPR+S PH R PQLLL
Sbjct: 299 TPSPRSSFSRPHRRQGRPQLLL 320
>07_03_1257 - 25241194-25242018
Length = 274
Score = 30.7 bits (66), Expect = 1.5
Identities = 34/118 (28%), Positives = 48/118 (40%)
Frame = -3
Query: 483 TFPPSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPRATPHALGRE 304
T ++A E AT P+ P P + RP S PR A R P GR+
Sbjct: 8 TATAAAAAECPATSPSPSSPPPLQ-----PRPRS--PRPMPQAVRHRSLQPPAPDVAGRD 60
Query: 303 ELPV*AQVHRTLSRG*VANRSPSPRASVRHPHTRHRSPQLLLCCDTSCTVPAHARTLP 130
P A + + R +A+ + + R R H+R R P+ T+ T P R LP
Sbjct: 61 STPSPASMTPSRCRTTLASTTTTRRRPPRRLHSRPRHPR---GRTTASTTPQPPRPLP 115
>07_03_0183 -
14822973-14823139,14823232-14823627,14823861-14824005,
14824174-14824380
Length = 304
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/83 (25%), Positives = 36/83 (43%)
Frame = +3
Query: 99 SAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGHSLEEMETYWRPILERVSD 278
+ H+ + R E +R Y++ R+ A E +G+ ++ E W P D
Sbjct: 153 NCHELTIPLRTIEESRAGGTYRETRNMARNEQ-EGSSSST--PMQMYEAGWEP----TGD 205
Query: 279 APGPTPEALHALGRAEWHGGNRD 347
APG T H++G + W + D
Sbjct: 206 APGWTQAPRHSIGVSSWASASED 228
>08_01_0718 -
6365506-6366047,6381623-6381937,6382857-6383082,
6383295-6383458,6383498-6383934,6384395-6384669
Length = 652
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 159 YKKCRSRAAAEVIDGACGGVGHSLEEMETYWRPILERVSDAPGPTPEALHALGRAEWHGG 338
Y+K R+R E + + ++ E W P DAPG T H+ G + WH
Sbjct: 555 YRKTRNRPRQEHEESSSS---IPVQMYEADWEP----TGDAPGWTQAPRHSTGGSSWHSA 607
Query: 339 NRDYTQ 356
N + Q
Sbjct: 608 NENRWQ 613
>06_03_1037 -
27058002-27058082,27058856-27059041,27060033-27060176,
27060284-27061183
Length = 436
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = -3
Query: 477 PPSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPR 331
PP P P PA AS S P PPR+ +AG R PR
Sbjct: 103 PPLGEVAPKQPVPAKLFDAPAAEASSSEPPPPPPPRTLPSAGAGRGVPR 151
>06_01_0889 - 6807449-6809257
Length = 602
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 588 PISITSIP-LRHFHSILARRLLASCPPDARQ 677
PI IT+I LR HS L R LAS PP AR+
Sbjct: 12 PIPITTIAELRQHHSQLVRLGLASHPPHARR 42
>04_04_1210 +
31761689-31762255,31762318-31762322,31763009-31763146,
31774759-31775368
Length = 439
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Frame = -1
Query: 494 PCIE-----HFRLQVHRNRTPLTRTYTVRARRSSPVKAGGLDLFHRDRLPQLGVVA 342
PCI H+ L +HRNR R + R+S + GG L RD L +G A
Sbjct: 19 PCISNLQTLHYNLLLHRNRKTNGRKLRSVSCRASAGRGGGRGLDRRDVLLGIGAAA 74
>03_04_0088 +
17209568-17209876,17209966-17210595,17210846-17211019,
17211434-17211515,17212091-17212278,17212993-17213152,
17213441-17213763,17213860-17213967,17214116-17214189,
17214249-17214361,17214461-17214741
Length = 813
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +3
Query: 414 SPGPD----GIRSGQWRAVPVHLKAEMFNAWMARGEIPEILRQCRTVFVPKV 557
+PGPD G W + + + N ++ GE+PE + Q V PKV
Sbjct: 412 APGPDSFTVGFYQAHWETIGPSVTRAVLN-FLNGGELPEAINQTTLVLTPKV 462
>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
Length = 218
Score = 29.5 bits (63), Expect = 3.5
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = -2
Query: 748 LXSPSTGVQYCEFSSVPSAQINPRC--RASGGQLANS-LRAKME*KCLRGIDVIEIGRYS 578
L SPS G +YC+ V +N RC R + G++ ++A + I V+ R+
Sbjct: 58 LRSPS-GSRYCQEPVVTHDFLNTRCRRRPNYGEVEEMIMKAAKMGQMSSQIGVVL--RHQ 114
Query: 577 PGPPGLSTLGTKTVRHCRRISGISPRAIHALNISAFKCTGTARH 446
G P + ++ + + H + G++P+ + L K +H
Sbjct: 115 HGIPLVKSIASSKILHILKAHGLAPKILEDLYFLIKKAVAIRKH 158
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = -3
Query: 477 PPSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSR 343
PP Q PH P P P + GRP P +A+ AG +
Sbjct: 147 PPLYEQSPHRRQPGPSPPPPPPRCRRRGRP-RAPAAAAAAAGTKK 190
>09_02_0032 + 3142842-3143148,3143321-3143363,3144117-3144420
Length = 217
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 405 WRTSPGPDGIRSGQWR 452
WRT P PDG G+WR
Sbjct: 10 WRTDPMPDGQGMGRWR 25
>02_01_0709 +
5315119-5315194,5316068-5316303,5316426-5316578,
5317011-5317091,5317201-5317255,5317710-5318008,
5318053-5318064
Length = 303
Score = 28.7 bits (61), Expect = 6.1
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 3/103 (2%)
Frame = +2
Query: 230 RGDGDLLATYPRESVRCTWAYTGSSSRPRACGVARGQ-SRL-HPAVEADLGGRD-QGLPL 400
+G + A S GSS RP A A GQ SRL +PA + G+D + +
Sbjct: 44 KGSSSMAAINSAPSNNALAIAAGSSKRPPAAAAAGGQPSRLNNPADQPSASGKDGKAAVV 103
Query: 401 *LANFAGPGRYTFGSVACGSCALEGGNVQCMDGTRRNTRNSTA 529
G G++ G+ + + EG RR +N A
Sbjct: 104 KKEGGGGGGKHHGGASSAAASEHEGPKTPDAKTLRRLAQNREA 146
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -3
Query: 477 PPSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPRATPHAL 313
PP+ +Q+P P + P P + + P PP +A+ A S+ P+AT L
Sbjct: 422 PPAPSQQPQPPPPPSH-PTPITSVAPAPPP---PPPAAAAAAASQPSPQATKSPL 472
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 331 CHSARPRA*RASGVGPGASDTLSRIGRQ*VSISSSECPTPPHAP 200
CH +P+A +G PGA+ L + R + +S S P H P
Sbjct: 86 CHGGQPKASPWAGSPPGAATHLQQPSR--MKLSPSPAPGAQHLP 127
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 331 CHSARPRA*RASGVGPGASDTLSRIGRQ*VSISSSECPTPPHAP 200
CH +P+A +G PGA+ L + R + +S S P H P
Sbjct: 86 CHGGQPKASPWAGSPPGAATHLQQPSR--MKLSPSPAPGAQHLP 127
>04_04_0174 + 23305163-23305271,23305372-23305430,23305567-23305830
Length = 143
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 485 EHFRLQVHRNRTPLTRTYTVRARRSSPVKAGGLDLFHRD 369
+H R +V R L R Y +ARR SP+ G L D
Sbjct: 103 KHHRDEVARMHEMLKRDYASKARRRSPINNGEPSLEEED 141
>02_02_0540 - 11334744-11334832,11335445-11335494,11335574-11336805
Length = 456
Score = 28.3 bits (60), Expect = 8.1
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Frame = -1
Query: 689 DKSALSCIRGAASQQPPGQDGVKVSQGNRRDRDRSIFPRSTWSLHLRYKDGSALP*NFGY 510
D S LSC R A Q P + GV + + +R S P S W ++G L +G
Sbjct: 96 DSSVLSCPRFVALQGHPPELGVLLGRASRHFDAWSDVPLSMWD----SRNGRVLVEIYGK 151
Query: 509 FASCHPCIEHFRLQVHRNRTP----LTRTYTVRARRSSPVKAGGLDLFHR 372
A P + + V+ +TP L R++T P G ++R
Sbjct: 152 LAVHSPLLPPADISVY-PQTPLKVWLDRSFTYNLHEFLPEDGGNGREYYR 200
>02_02_0317 + 8893593-8894207
Length = 204
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +3
Query: 249 WRPILERVSDAPGPTPEALHALGRAEWHGGNRDYTQLWKPISVEEIKASRFDWRTSPG 422
WRP R +D PT L +G A G+R + + W+P + + + W G
Sbjct: 84 WRPGGGRDTDPHSPTSWRLDPVGEAGEESGSR-WGRRWRPDPASDGRGAGEAWEVEAG 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,423,579
Number of Sequences: 37544
Number of extensions: 793575
Number of successful extensions: 3023
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3022
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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