Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_P06
(842 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 118 1e-26
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 39 0.010
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 37 0.030
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 33 0.37
AY051779-1|AAK93203.1| 280|Drosophila melanogaster LD30408p pro... 33 0.37
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 33 0.37
AE013599-1875|AAF58257.1| 280|Drosophila melanogaster CG8617-PA... 33 0.37
BT011008-1|AAR27879.1| 706|Drosophila melanogaster AT12204p pro... 31 1.5
AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-P... 31 1.5
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 31 2.0
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 31 2.6
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 31 2.6
S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription ... 30 3.5
BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p pro... 30 3.5
BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p pro... 30 3.5
AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA... 30 3.5
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC... 30 3.5
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB... 30 3.5
AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcripti... 30 3.5
AY128464-1|AAM75057.1| 659|Drosophila melanogaster RE19005p pro... 30 4.6
AY069092-1|AAL39237.1| 298|Drosophila melanogaster GH11210p pro... 30 4.6
AY060958-1|AAL28506.1| 568|Drosophila melanogaster GM08907p pro... 30 4.6
AY060713-1|AAL28261.1| 596|Drosophila melanogaster GH15479p pro... 30 4.6
AF201924-2|AAF71699.1| 298|Drosophila melanogaster CRC-B protein. 30 4.6
AF201924-1|AAF71698.1| 373|Drosophila melanogaster CRC-A protein. 30 4.6
AE014296-3503|AAF51694.1| 596|Drosophila melanogaster CG9389-PA... 30 4.6
AE014296-1984|AAN11876.1| 649|Drosophila melanogaster CG6091-PC... 30 4.6
AE014296-1983|AAF50041.1| 649|Drosophila melanogaster CG6091-PA... 30 4.6
AE014134-3389|AAN11118.1| 298|Drosophila melanogaster CG8669-PB... 30 4.6
AE014134-3387|AAF53990.1| 381|Drosophila melanogaster CG8669-PA... 30 4.6
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 29 6.0
AY051997-1|AAK93421.1| 721|Drosophila melanogaster LD46453p pro... 29 6.0
AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein... 29 6.0
AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA... 29 6.0
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 29 8.0
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 29 8.0
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 29 8.0
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 29 8.0
AE014134-3144|AAN11054.2| 452|Drosophila melanogaster CG10263-P... 29 8.0
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 118 bits (283), Expect = 1e-26
Identities = 73/222 (32%), Positives = 111/222 (50%), Gaps = 2/222 (0%)
Frame = +3
Query: 108 KTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGHSLEEMETYWRPILERVSDAP- 284
+ R+ RR +YA VQ + K + R +++G V S E M YWR ++ + S +
Sbjct: 267 RNRRESRRQQYAVVQRNWDKHKGRCIKSLLNGTDESVMPSQEIMVPYWREVMTQPSPSSC 326
Query: 285 -GPTPEALHALGRAEWHGGNRDYTQLWKPISVEEIKASRFDWRTSPGPDGIRSGQWRAVP 461
G + H+L R +W I+ ++++ASR +SPGPDGI R VP
Sbjct: 327 SGEVIQMDHSLER------------VWSAITEQDLRASRVSLSSSPGPDGITPKSAREVP 374
Query: 462 VHLKAEMFNAWMARGEIPEILRQCRTVFVPKVERPGGPGEYRPISITSIPLRHFHSILAR 641
+ + N + G +P +R RTVF+PK P ++RPIS+ S+ +R ++ILA
Sbjct: 375 SGIMLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFRPISVPSVLVRQLNAILAT 434
Query: 642 RLLASCPPDARQRGFICADGTLENSQYWTPVLGDXRXXLRXC 767
RL +S D RQRGF+ DG +N+ VL R C
Sbjct: 435 RLNSSINWDPRQRGFLPTDGCADNATIVDLVLRHSHKHFRSC 476
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 38.7 bits (86), Expect = 0.010
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKAS--RFDWRTSPGPDGIRSGQWRAVPVHLKAEMFNAWMARGEIPEILRQCR 536
KPI VEEI + + SPG D + + +A+PV + + A + +Q +
Sbjct: 435 KPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWK 494
Query: 537 TVFVPKVERPGGPGE----YRPISITSIPLRHFHSILARRL 647
+ + +PG P E YRPIS+ S + + ++A RL
Sbjct: 495 MAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRL 535
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 37.1 bits (82), Expect = 0.030
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 414 SPGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILRQCRTVFVPKVERPGGP-GE 581
SPG D + + + HLK ++ FN + G+ P R + + K +P
Sbjct: 453 SPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDINS 512
Query: 582 YRPISITSIPLRHFHSILARRL 647
YRPIS+ S + I+A+RL
Sbjct: 513 YRPISLLSCLGKTLEKIIAQRL 534
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 33.5 bits (73), Expect = 0.37
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 360 WKPISVEEIKASRFDWRTSPGPDGIRSGQWRAVP----VHLKAEMFNAWMARGEIPEILR 527
++P + ++ + + R SPG D I +P +H+ +FNA G P+ +
Sbjct: 431 FRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHI-CLLFNAIAKLGYFPQKWK 489
Query: 528 QCRTVFVPKVERPGG-PGEYRPISITSIPLRHFHSILARRL 647
+ V +PK + P YRPIS+ + + F +L R+
Sbjct: 490 KSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
>AY051779-1|AAK93203.1| 280|Drosophila melanogaster LD30408p
protein.
Length = 280
Score = 33.5 bits (73), Expect = 0.37
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 131 PALLSTGFVGTSCPIIVQIVSPPCSLGSHS-PARSSSPRTLNH 6
P LL++G G+S + V I SP CS GSH ++S S LNH
Sbjct: 86 PTLLTSGCGGSSNSVSVSI-SPTCSAGSHPLDSQSLSQSPLNH 127
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 33.5 bits (73), Expect = 0.37
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +3
Query: 360 WKPISVEEIKASRFDWRTSPGPDGIRSGQWRAVP----VHLKAEMFNAWMARGEIPEILR 527
++P + ++ + + R SPG D I +P +H+ +FNA G P+ +
Sbjct: 431 FRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHI-CLLFNAIAKLGYFPQKWK 489
Query: 528 QCRTVFVPKVERPGG-PGEYRPISITSIPLRHFHSILARRL 647
+ V +PK + P YRPIS+ + + F +L R+
Sbjct: 490 KSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRI 530
>AE013599-1875|AAF58257.1| 280|Drosophila melanogaster CG8617-PA
protein.
Length = 280
Score = 33.5 bits (73), Expect = 0.37
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -1
Query: 131 PALLSTGFVGTSCPIIVQIVSPPCSLGSHS-PARSSSPRTLNH 6
P LL++G G+S + V I SP CS GSH ++S S LNH
Sbjct: 86 PTLLTSGCGGSSNSVSVSI-SPTCSAGSHPLDSQSLSQSPLNH 127
>BT011008-1|AAR27879.1| 706|Drosophila melanogaster AT12204p
protein.
Length = 706
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 474 PSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPRATPHALGREELP 295
P++A+ P A D P PA+ A++ P + P A PH +EE P
Sbjct: 620 PAAAEAPPAGDAAPVAPPPAEPAAEGAAPEAPAPAPAPAPAPEAPAAEEAPHEAPKEEAP 679
>AE014298-1732|AAF48124.1| 706|Drosophila melanogaster CG18130-PA
protein.
Length = 706
Score = 31.5 bits (68), Expect = 1.5
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = -3
Query: 474 PSSAQEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPRATPHALGREELP 295
P++A+ P A D P PA+ A++ P + P A PH +EE P
Sbjct: 620 PAAAEAPPAGDAAPVAPPPAEPAAEGAAPEAPAPAPAPAPAPEAPAAEEAPHEAPKEEAP 679
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 31.1 bits (67), Expect = 2.0
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI++ E+ + + S PG D I + + +P + +N+ + G PE +
Sbjct: 491 QPITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWK 550
Query: 528 QCRTVFVPKVERPGG-PGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 551 HAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRL 591
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + + +P + +N+ + G PE +
Sbjct: 479 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWK 538
Query: 528 QCRTVFVPKVERPGG-PGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 539 HAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRL 579
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 30.7 bits (66), Expect = 2.6
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + +A+P + +N+ + G P+ +
Sbjct: 479 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWK 538
Query: 528 QCRTVFVPKVERP-GGPGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 539 HAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>S61883-1|AAB26991.2| 2068|Drosophila melanogaster transcription
factor TFIID 230kda subunit protein.
Length = 2068
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1308 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1359
>BT024196-1|ABC86258.1| 1964|Drosophila melanogaster RE63802p protein.
Length = 1964
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>BT004888-1|AAO47866.1| 2096|Drosophila melanogaster RE74933p protein.
Length = 2096
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>AE014297-491|AAF54102.3| 2065|Drosophila melanogaster CG17603-PA,
isoform A protein.
Length = 2065
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
isoform C protein.
Length = 2098
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
isoform B protein.
Length = 2129
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>AE001572-25|AAD19815.1| 2065|Drosophila melanogaster transcription
factor protein.
Length = 2065
Score = 30.3 bits (65), Expect = 3.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 63 GRRNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVGH 224
G L D +++ H S ++R + Y V KK + + ++ GACG VGH
Sbjct: 1305 GMPTSLGDPKSSGGH--SHKERDSGYKEVSPSRKKFKLKPDLKLKCGACGQVGH 1356
>AY128464-1|AAM75057.1| 659|Drosophila melanogaster RE19005p
protein.
Length = 659
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 66 RRNDLHDD--RT--ASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVG 221
RR +++D+ RT S HK++R KRR + LYK+ R V A G G
Sbjct: 58 RRGEVYDELARTHRCSPHKSTRSKRREHHEAHAHLYKRDRLEREKLVHPTAAAGSG 113
>AY069092-1|AAL39237.1| 298|Drosophila melanogaster GH11210p
protein.
Length = 298
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 QELYKKCRSRAAAEVIDGACG-GVGHSLEEMETYWRPILERVSDAPGPT 293
Q+L + C S+A++ + + G GV S+ + + W P L S +P PT
Sbjct: 160 QQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELISSSSSPAPT 208
>AY060958-1|AAL28506.1| 568|Drosophila melanogaster GM08907p
protein.
Length = 568
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 66 RRNDLHDD--RT--ASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVG 221
RR +++D+ RT S HK++R KRR + LYK+ R V A G G
Sbjct: 58 RRGEVYDELARTHRCSPHKSTRSKRREHHEAHAHLYKRDRLEREKLVHPTAAAGSG 113
>AY060713-1|AAL28261.1| 596|Drosophila melanogaster GH15479p
protein.
Length = 596
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -3
Query: 546 QRRFGTAVEFRVFRLVPSMH*TFPPSSAQEPHATDPNVYRPGP--AKFASQSGRP*SLPP 373
+R + ++ L + +P EP + +PN Y P P F SQ+ P S P
Sbjct: 520 RRCLAASTDYLALELGNCLQQNYPSPRDDEPRSVNPNEYGPAPETRDFTSQTDFPDSDTP 579
Query: 372 RSAST 358
+ T
Sbjct: 580 ETTDT 584
>AF201924-2|AAF71699.1| 298|Drosophila melanogaster CRC-B protein.
Length = 298
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 QELYKKCRSRAAAEVIDGACG-GVGHSLEEMETYWRPILERVSDAPGPT 293
Q+L + C S+A++ + + G GV S+ + + W P L S +P PT
Sbjct: 160 QQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELISSSSSPAPT 208
>AF201924-1|AAF71698.1| 373|Drosophila melanogaster CRC-A protein.
Length = 373
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 QELYKKCRSRAAAEVIDGACG-GVGHSLEEMETYWRPILERVSDAPGPT 293
Q+L + C S+A++ + + G GV S+ + + W P L S +P PT
Sbjct: 235 QQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELISSSSSPAPT 283
>AE014296-3503|AAF51694.1| 596|Drosophila melanogaster CG9389-PA
protein.
Length = 596
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -3
Query: 546 QRRFGTAVEFRVFRLVPSMH*TFPPSSAQEPHATDPNVYRPGP--AKFASQSGRP*SLPP 373
+R + ++ L + +P EP + +PN Y P P F SQ+ P S P
Sbjct: 520 RRCLAASTDYLALELGNCLQQNYPSPRDDEPRSVNPNEYGPAPETRDFTSQTDFPDSDTP 579
Query: 372 RSAST 358
+ T
Sbjct: 580 ETTDT 584
>AE014296-1984|AAN11876.1| 649|Drosophila melanogaster CG6091-PC,
isoform C protein.
Length = 649
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 66 RRNDLHDD--RT--ASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVG 221
RR +++D+ RT S HK++R KRR + LYK+ R V A G G
Sbjct: 58 RRGEVYDELARTHRCSPHKSTRSKRREHHEAHAHLYKRDRLEREKLVHPTAAAGSG 113
>AE014296-1983|AAF50041.1| 649|Drosophila melanogaster CG6091-PA,
isoform A protein.
Length = 649
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 66 RRNDLHDD--RT--ASAHKTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGGVG 221
RR +++D+ RT S HK++R KRR + LYK+ R V A G G
Sbjct: 58 RRGEVYDELARTHRCSPHKSTRSKRREHHEAHAHLYKRDRLEREKLVHPTAAAGSG 113
>AE014134-3389|AAN11118.1| 298|Drosophila melanogaster CG8669-PB,
isoform B protein.
Length = 298
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 QELYKKCRSRAAAEVIDGACG-GVGHSLEEMETYWRPILERVSDAPGPT 293
Q+L + C S+A++ + + G GV S+ + + W P L S +P PT
Sbjct: 160 QQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELISSSSSPAPT 208
>AE014134-3387|AAF53990.1| 381|Drosophila melanogaster CG8669-PA,
isoform A protein.
Length = 381
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 150 QELYKKCRSRAAAEVIDGACG-GVGHSLEEMETYWRPILERVSDAPGPT 293
Q+L + C S+A++ + + G GV S+ + + W P L S +P PT
Sbjct: 243 QQLNEDCESQASSSLDSRSTGSGVCSSIADADEDWVPELISSSSSPAPT 291
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 29.5 bits (63), Expect = 6.0
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 480 MFNAWMARGEIPEILRQCRTVFVPKVERPGGPGEYRPISITSIPLRHFHSILARRL 647
+FNA G P+ ++ + +PK E+ YRPIS+ + + F L R+
Sbjct: 16 LFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRI 71
>AY051997-1|AAK93421.1| 721|Drosophila melanogaster LD46453p
protein.
Length = 721
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 69 RNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRA 182
R+D D R+ S+H++SR R + EL+++ R R+
Sbjct: 474 RHDQQDQRSISSHRSSRDIVRVKERTEAELHQRSRERS 511
>AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein
protein.
Length = 1641
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 69 RNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRA 182
R+D D R+ S+H++SR R + EL+++ R R+
Sbjct: 1395 RHDQQDQRSISSHRSSRDIVRVKERTEAELHQRSRERS 1432
>AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA
protein.
Length = 1641
Score = 29.5 bits (63), Expect = 6.0
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 69 RNDLHDDRTASAHKTSRQKRRAEYARVQELYKKCRSRA 182
R+D D R+ S+H++SR R + EL+++ R R+
Sbjct: 1395 RHDQQDQRSISSHRSSRDIVRVKERTEAELHQRSRERS 1432
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 29.1 bits (62), Expect = 8.0
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + + +P + +N+ + G P+ +
Sbjct: 363 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWK 422
Query: 528 QCRTVFVPKVERP-GGPGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 423 HAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 463
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.1 bits (62), Expect = 8.0
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + + +P + +N+ + G P+ +
Sbjct: 479 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWK 538
Query: 528 QCRTVFVPKVERP-GGPGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 539 HAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 29.1 bits (62), Expect = 8.0
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + + +P + +N+ + G P+ +
Sbjct: 441 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWK 500
Query: 528 QCRTVFVPKVERP-GGPGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 501 HAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 541
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 29.1 bits (62), Expect = 8.0
Identities = 24/101 (23%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Frame = +3
Query: 363 KPISVEEIKASRFDWRTS--PGPDGIRSGQWRAVPVHLKAEM---FNAWMARGEIPEILR 527
+PI+++E+ + + S PG D I + + +P + +N+ + G P+ +
Sbjct: 479 QPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWK 538
Query: 528 QCRTVFVPKVERP-GGPGEYRPISITSIPLRHFHSILARRL 647
+ + K + P YRPIS+ S + F +L +RL
Sbjct: 539 HAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRL 579
>AE014134-3144|AAN11054.2| 452|Drosophila melanogaster CG10263-PD,
isoform D protein.
Length = 452
Score = 29.1 bits (62), Expect = 8.0
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -3
Query: 495 SMH*TFPPSSA-QEPHATDPNVYRPGPAKFASQSGRP*SLPPRSASTAGCSRDCPRATPH 319
S+H T + Q D + Y A F S +G P S PP +TA P +
Sbjct: 363 SLHHTLKKGTPHQSESVADASYYSSVLASFGSAAGNPGSGPPGGGATAAAQPANPSGSHS 422
Query: 318 ALG 310
A+G
Sbjct: 423 AVG 425
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,030,546
Number of Sequences: 53049
Number of extensions: 1181995
Number of successful extensions: 3876
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3870
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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