Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_O01
(959 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 4e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 5e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 6e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 40 3e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 40 3e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 30 0.036
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 29 0.047
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.083
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 5.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.2 bits (112), Expect = 5e-08
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +3
Query: 96 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESXST 254
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 255 XRILADLQMNWIDKRLSWNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
+ L+ W D + W+ E+G T L V SE +W PD VL N A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 2e-06
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 447 GL 452
L
Sbjct: 167 CL 168
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.4 bits (100), Expect = 2e-06
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Query: 447 GL 452
L
Sbjct: 167 CL 168
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V++NGS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 43.2 bits (97), Expect = 4e-06
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 8/101 (7%)
Frame = +3
Query: 114 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESXSTXRILAD 272
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 273 LQMNWIDKRLSWNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
++ +W D +L W+ E+G L V S+ +WRPD VL N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.7 bits (96), Expect = 5e-06
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGX-RTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D + WN ++G R + RLW+PD ++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 GL 452
L
Sbjct: 136 CL 137
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 42.3 bits (95), Expect = 6e-06
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESXSTXRILAD---LQMNWIDKRLS 305
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 306 WNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
WN E+G L V SE +W PD VL N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W+D L WN E+ G + + +LW+PD ++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 447 GL 452
L
Sbjct: 99 CL 100
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.9 bits (94), Expect = 8e-06
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Frame = +3
Query: 141 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESXSTXRILADLQMNWIDKR 299
+ D LL+ Y+R P ++ V + L L N++ T + ++ W D +
Sbjct: 24 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 81
Query: 300 LSWNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
L WN ++G L V SE +W PD VL N A
Sbjct: 82 LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 1e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESXSTXRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
W E+G L V S+ +WRPD VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 1e-05
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 141 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESXSTXRILAD---LQMNWIDKRLS 305
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 306 WNAGEWGXRTWL-VXSERLWRPDXVLLNAA 392
W E+G L V S+ +WRPD VL N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 40.3 bits (90), Expect = 3e-05
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESXSTXRILADLQMNW 287
N +++S ++D+LL YD PD V + + +R I E T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAGEWGXRTWLVXSERLWRPDXVLLN 386
+D+RL++ G+ + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 40.3 bits (90), Expect = 3e-05
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESXSTXRILADLQ 278
C++ TS S + L YDR+ P+ K ++ L ++H N+ E T L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVL 380
+ W L+W + E+ + V S +W PD V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.9 bits (89), Expect = 3e-05
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 285 WIDKRLSWNAGEW-GXRTWLVXSERLWRPDXVLLNAA 392
W D L WNA E+ G R V R+WRPD +L N A
Sbjct: 62 WTDHHLKWNASEFAGIRVIRVPYNRVWRPDTILYNNA 98
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 36.3 bits (80), Expect = 4e-04
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESXSTXRILADLQMNWIDKRLSWNAGEWGXRTWL-VXSERLWR 365
K+ VN L ++ N+ E + L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDXVLLNAAATTAGDYALR 422
PD VL N A G+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 29.9 bits (64), Expect = 0.036
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESXSTXRILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGXRTWLVXSE---RLWRPDXVLLN 386
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 29.5 bits (63), Expect = 0.047
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESXSTXRILADLQMNW 287
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 288 IDKRLSWNAGEWGXRTWLVXSE---RLWRPDXVLLN 386
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 28.7 bits (61), Expect = 0.083
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +3
Query: 129 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESXSTXRILADLQMNWID 293
++++++++LL Y+ P + VV + +R + E + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 294 KRLSWNAGEWGXRTWLVXSERLWRPDXVLLN 386
RLS+ + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.6 bits (46), Expect = 5.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 345 TPAKSXSPIPLRSNSVVCRSNSFED 271
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 7.2
Identities = 12/43 (27%), Positives = 15/43 (34%)
Frame = +1
Query: 733 PSXSPRAXXXXXPPXXSXPXPXVXPXXXXPXLPPXPAXXXPST 861
P SP+A PP S P P P P P++
Sbjct: 27 PHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISPAS 69
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,883
Number of Sequences: 438
Number of extensions: 2733
Number of successful extensions: 44
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 31565079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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