Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_M22
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 63 4e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 59 4e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 56 4e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 56 4e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 56 5e-10
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 55 7e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 55 9e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 3e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 45 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 8e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 30 0.023
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.040
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.16
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 2.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.9 bits (146), Expect = 4e-12
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Frame = +3
Query: 111 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 269
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 270 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 443
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 444 VSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
+ G V W + + + +P D QTC KF
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 59.3 bits (137), Expect = 4e-11
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 7/147 (4%)
Frame = +3
Query: 135 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 302
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 303 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 473
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 474 KHLDISTPISMQLDNWPNDMQTCTFKF 554
L I M L+N+P D Q C +F
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQF 148
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 9/151 (5%)
Frame = +3
Query: 129 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 287
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 288 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 461
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 462 VSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
V W + + ++ +P D QTC KF
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKF 167
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.8 bits (131), Expect = 2e-10
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Frame = +3
Query: 207 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 380
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 381 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTF 548
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 549 KF 554
KF
Sbjct: 168 KF 169
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.4 bits (130), Expect = 3e-10
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Frame = +3
Query: 156 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 320
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 321 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKHLDIST 494
W E+G L V S+ +WRPD+VL N A A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 495 PISMQLDNWPNDMQTCTFKF 554
+ ++ +P D QTC KF
Sbjct: 152 SCEIDVEYFPFDEQTCVLKF 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 56.0 bits (129), Expect = 4e-10
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Frame = +3
Query: 102 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 260
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 261 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 434
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 435 ---RARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
+A + + G V W + + ++ +P D QTC KF
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKF 163
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 3/118 (2%)
Frame = +3
Query: 210 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 386
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 387 VVLLNAAATTAGDYALRARV--SNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
+L N A + V S+ G V W+ H + + ++ +P D Q C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 55.6 bits (128), Expect = 5e-10
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Frame = +3
Query: 156 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 314
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 315 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKH 479
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 480 LDISTPISMQLDNWPNDMQTCTFKF 554
+ + ++ +P D Q+C KF
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKF 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V++NGS ++ + + + +P D Q C KF
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 55.2 bits (127), Expect = 7e-10
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V++NGS ++ + + + +P D Q C KF
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 197
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 54.8 bits (126), Expect = 9e-10
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V++NGS ++ + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V+++GS ++ + M + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKF 129
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 10/142 (7%)
Frame = +3
Query: 156 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 320
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 321 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKHLD 485
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 486 ISTPISMQLDNWPNDMQTCTFK 551
+ S+ ++ +P D+QTC K
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLK 170
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V+++GS ++ + M + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKF 129
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 53.2 bits (122), Expect = 3e-09
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +3
Query: 129 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 293
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 294 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 464
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 465 SWIKHLDISTPISMQLDNWPNDMQTCT 545
+ + WP D+ CT
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCT 174
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V+++GS ++ + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKF 129
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V+++GS ++ + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKF 129
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 419
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 420 GDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
G Y V+++GS ++ + + + +P D Q C KF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKF 129
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.0 bits (119), Expect = 7e-09
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 7/156 (4%)
Frame = +3
Query: 108 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 272
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 273 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 447 SNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTFKF 554
NNG+ ++ + + + +P D Q C KF
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKF 166
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.0 bits (114), Expect = 3e-08
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +3
Query: 144 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 308
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 309 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 479
RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 480 LDISTPISMQLDNWPNDMQTC 542
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 48.8 bits (111), Expect = 6e-08
Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +3
Query: 132 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 299
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 300 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 467
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 468 WIKHLDISTPISMQLDNWPNDMQTCTFKF 554
+ + + +WP D C F
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINF 187
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/32 (28%), Positives = 18/32 (56%)
Frame = +1
Query: 523 PTTCRLARSSFGSRMHNSDXMDFVIDKRIYSM 618
P R +FGS +H+ + ++ +DK+ + M
Sbjct: 177 PYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Frame = +3
Query: 156 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 314
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 315 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 479
L +N G T L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 480 LDISTPISMQLDNWPNDMQTCTFK 551
+ ++ M L +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.8 bits (101), Expect = 1e-06
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 135 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 302
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 303 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 455
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 456 GSVSWIKHLDISTPISMQLDNWPNDMQTC 542
GS++ L I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.6 bits (98), Expect = 2e-06
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Frame = +3
Query: 135 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 302
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 303 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 455
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 456 GSVSWIKHLDISTPISMQLDNWPNDMQTC 542
GS++ L I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 12/144 (8%)
Frame = +3
Query: 156 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 314
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 315 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKH 479
L +N G T L + R+W PD+ N + + R+ NGSV +
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 480 LDISTPISMQLDNWPNDMQTCTFK 551
+ ++ M L +P D Q C+ +
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 9e-05
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 249 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 428
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 429 ALR---ARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCT 545
R R+S +GSV++ + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 35.1 bits (77), Expect = 8e-04
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 300 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 452
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 453 NGSVSWIKHLDISTPISMQLDNWPNDMQTC 542
+GS++ L I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 132 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 296
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 297 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 467
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 468 WIKHLDISTPISMQLDNWPNDMQTCTF 548
++ + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 132 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 296
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 297 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 467
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 468 WIKHLDISTPISMQLDNWPNDMQTCTF 548
++ + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.3 bits (75), Expect = 0.001
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 8/147 (5%)
Frame = +3
Query: 132 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 296
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 297 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 467
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 468 WIKHLDISTPISMQLDNWPNDMQTCTF 548
++ + +L+ +P D C+F
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.023
Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +3
Query: 210 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 383
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 384 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCTF 548
D ++ R+ NG+V+++ + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.040
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 246 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 419
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 420 GDYALRAR---VSNNGSVSWIKHLDISTPISMQLDNWPNDMQTCT 545
+ ++ + ++ ++ ++ L + +M+ +++P+D Q C+
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICS 147
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.5 bits (58), Expect = 0.16
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +3
Query: 210 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 371
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 372 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKHLDISTPISMQLDNWPNDMQ 536
LW+PD LNA + AL + S+ N +V + + M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 537 TC 542
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.6
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 366 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKHLDISTPISMQLDNWPNDMQ 536
+ +WRPD NA + T + + + ++ ++ L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 537 TC 542
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 353 PSAAAPLPCVPTQS 312
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,124
Number of Sequences: 438
Number of extensions: 4814
Number of successful extensions: 81
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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