Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_L23
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   1.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   2.1  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.7  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   4.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   6.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.5  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 222 VRNAAIRAYDRHSNRIQMHRLQREVRSRLSDARNDNWHS 338
           +RN+    +D   N    H   +   S  SD +N+N H+
Sbjct: 409 IRNSRCANFDNQDNNHYNHNHNQARHSSKSDNQNNNQHN 447


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 410 RYYASPLTPFRPTT 451
           R+Y +P TPF P T
Sbjct: 290 RFYYNPFTPFGPVT 303


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 410 RYYASPLTPFRPTT 451
           R+Y +P TPF P T
Sbjct: 290 RFYYNPFTPFGPVT 303


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 625 LETRSTTSNLGRHQAPTASTTARSSGLFNHDSAG*PSERHG 747
           +ET S+ S   R  +  +S+T+ S       +AG PS+R+G
Sbjct: 505 VETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNG 545


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +2

Query: 479 AAGRCTARAVHH--QHSTRGPRTHRVSRQGGRAQSSPAA 589
           +A    A AV++  QH++  P        G  A +SPAA
Sbjct: 44  SAAAVAAAAVNYAQQHNSPSPTGSSPQHSGSSASTSPAA 82


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/46 (23%), Positives = 22/46 (47%)
 Frame = +1

Query: 619 TKLETRSTTSNLGRHQAPTASTTARSSGLFNHDSAG*PSERHGSLG 756
           ++LE    TS + RH +  A    +   ++++DS   P  ++   G
Sbjct: 290 SQLEYDLQTSIMSRHYSTRAIVIEKGQSIWDYDSTYIPKVKNKKAG 335


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 205 RSGDSLMRWKLSSTSTSFEDLMI 137
           R G     W L ST+ S ED+ +
Sbjct: 208 RKGSIARCWSLDSTAASDEDISL 230


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,826
Number of Sequences: 438
Number of extensions: 5053
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)