Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_L22
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0042 - 12731228-12731362,12731984-12732046,12732136-127322...    37   0.017
07_01_0116 - 855122-855352,856733-857059,857095-858481,858636-85...    30   2.7  
04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879     30   2.7  
03_06_0014 - 31012116-31012229,31012773-31012985,31013058-310131...    29   3.5  
11_06_0130 - 20408835-20411771                                         29   4.6  

>07_03_0042 -
           12731228-12731362,12731984-12732046,12732136-12732207,
           12732783-12732855,12732937-12733005,12733375-12733439,
           12733677-12734087,12734186-12734230,12734338-12734413,
           12734555-12734629,12735101-12735207,12736573-12736635
          Length = 417

 Score = 37.1 bits (82), Expect = 0.017
 Identities = 22/76 (28%), Positives = 38/76 (50%)
 Frame = +1

Query: 160 TSFYLVFNKIMSTLKLTSEVRSGLYSHWRDVFEHVRSTAKIKHYADQNTSSGTPQERECS 339
           TS Y +FNK+ STL   S V SG ++  RD      +    + + D+ +SS + ++R  +
Sbjct: 164 TSGYTLFNKLRSTLSSASPVLSGAFAKLRDTRVSTYAKQGYEIFKDELSSSSSRKKRNHA 223

Query: 340 IRKSCNNVSVTSMEDL 387
              S   V  ++  +L
Sbjct: 224 RHASAGTVEKSTRTEL 239


>07_01_0116 -
           855122-855352,856733-857059,857095-858481,858636-858895
          Length = 734

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
 Frame = -1

Query: 668 SATIHSLMSW-FTVLVPYNSSSSHWLKNDS---CRNYPLVMTDPLLRSKFHLRFALALIS 501
           SA + SL+S  FTVL  Y+++  HWL+  S    +  P V+ D    +K  +   + L+ 
Sbjct: 261 SAAVWSLVSAAFTVLTAYSTTKLHWLQGGSTVVVQGGPTVVGD----NKADIFITMLLLV 316

Query: 500 CNSLLRVVFPLV 465
             +LL ++ PL+
Sbjct: 317 SIALLELLQPLL 328


>04_04_1215 - 31803261-31804847,31804927-31805052,31806502-31806879
          Length = 696

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 289 YADQNTSSGTPQERECSIRKSCN-NVSVTSMEDLSHEE 399
           + D   SSG+P   E S+ K C+ ++S TS  D  ++E
Sbjct: 523 HEDMQASSGSPDGSEPSVNKICDGSISWTSRNDFEYKE 560


>03_06_0014 -
           31012116-31012229,31012773-31012985,31013058-31013171,
           31013909-31014040,31014624-31014692,31014763-31015017,
           31015347-31015520,31016104-31016280,31016999-31017107,
           31017343-31017506,31018221-31018517
          Length = 605

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 18/71 (25%), Positives = 31/71 (43%)
 Frame = +1

Query: 202 KLTSEVRSGLYSHWRDVFEHVRSTAKIKHYADQNTSSGTPQERECSIRKSCNNVSVTSME 381
           KLT++  SG Y+  R        T K++ + D+N      +ERE   +    N+  +S  
Sbjct: 371 KLTTDFFSGAYAITRKASTEDEKTIKMQTWIDENDPEKVKEERE---KAEGENIRASSSL 427

Query: 382 DLSHEEIVTSY 414
               E++   Y
Sbjct: 428 QRKREQVKRKY 438


>11_06_0130 - 20408835-20411771
          Length = 978

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/58 (27%), Positives = 34/58 (58%)
 Frame = +2

Query: 368 LPRWKI*ATKKSSHLTFWLMLPSLTVDVITWRSLTEIQHVTSYCKKLRQVQISSETSI 541
           LP+  + +TKK  H    ++L +LTV +++  ++  + ++   C K R+ ++ + TSI
Sbjct: 715 LPQCSLKSTKKKKHQ---ILLIALTVCLVSTLAIFSLLYMLLTCHKRRKKEVPAMTSI 769


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,213,830
Number of Sequences: 37544
Number of extensions: 374463
Number of successful extensions: 714
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)