Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_I07
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ060036-1|AAY43130.1| 900|Homo sapiens polymerase (DNA directe... 36 0.19
AY136549-1|AAN52116.1| 900|Homo sapiens DNA polymerase N protein. 36 0.19
AL158068-2|CAM20461.1| 900|Homo sapiens polymerase (DNA directe... 36 0.19
AL136360-1|CAM16854.1| 900|Homo sapiens polymerase (DNA directe... 36 0.19
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 32 2.3
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 32 2.3
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 32 2.3
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 32 2.3
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein. 32 2.3
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 32 2.3
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 32 2.3
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 32 2.3
U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein. 31 5.3
BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein. 31 5.3
U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein. 31 7.0
U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein. 31 7.0
BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1 (chi... 31 7.0
AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 vari... 31 7.0
AK091259-1|BAC03622.1| 358|Homo sapiens protein ( Homo sapiens ... 30 9.3
>DQ060036-1|AAY43130.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Frame = +1
Query: 283 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 441
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 442 SGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDF 561
F + + R+V G+D SWK + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AY136549-1|AAN52116.1| 900|Homo sapiens DNA polymerase N protein.
Length = 900
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Frame = +1
Query: 283 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 441
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 442 SGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDF 561
F + + R+V G+D SWK + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AL158068-2|CAM20461.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Frame = +1
Query: 283 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 441
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 442 SGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDF 561
F + + R+V G+D SWK + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>AL136360-1|CAM16854.1| 900|Homo sapiens polymerase (DNA directed)
nu protein.
Length = 900
Score = 35.9 bits (79), Expect = 0.19
Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 7/100 (7%)
Frame = +1
Query: 283 RGCLTFRLTQMLTGHGC-----FGRYLFKIAGREPTA--QCHHCADRDEEDTAEHTLARC 441
RG + Q GHGC G L +P Q H A D+E A AR
Sbjct: 245 RGIVVLVKRQAEGGHGCPDAPACGPVLEGFVSDDPCIYIQIEHSAIWDQEQEAHQQFARN 304
Query: 442 SGFDEQRAALVAVIGEDLSLPRVVATMLGSDASWKAMLDF 561
F + + R+V G+D SWK + DF
Sbjct: 305 VLFQTMKCKCPVICFNAKDFVRIVLQFFGNDGSWKHVADF 344
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 237 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 296
Query: 156 SN 151
+
Sbjct: 297 ED 298
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC020164-1|AAH20164.1| 181|Homo sapiens YBX1 protein protein.
Length = 181
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 54 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 113
Query: 156 SN 151
+
Sbjct: 114 ED 115
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 315 HLRQPEGEASAVAAHPVREN---RADRLDGTDAGRRVRQ----AARPRLQHGPPRLEPPR 157
++R+P G + PV+ AD + GR VRQ RPR + GPPR PR
Sbjct: 197 YMRRPYGRRPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPR 256
Query: 156 SN 151
+
Sbjct: 257 ED 258
>U31468-1|AAC03241.1| 347|Homo sapiens homeobox protein protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.3
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Frame = -1
Query: 380 CAVGSLPAILKRYR-PKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVRMPADGSAKR 204
C S PA + +R P WP + S R P +R Q + R + R PA ++ R
Sbjct: 86 CPQASAPAWRRAWRSPLRSWPRSPAASP--RRPSTRRRQRPASSRRS---RCPAAVTSTR 140
Query: 203 RDHASSTDRR---DWSLRARTTNLPKP 132
R T R W RAR + P+P
Sbjct: 141 RRRCRLTRRTAKASWPKRARCSPSPRP 167
>BC116187-1|AAI16188.1| 1721|Homo sapiens TNS1 protein protein.
Length = 1721
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/85 (28%), Positives = 36/85 (42%)
Frame = -3
Query: 351 EEVPAKTPMAGQHLRQPEGEASAVAAHPVRENRADRLDGTDAGRRVRQAARPRLQHGPPR 172
+ VP P A QP +S +HP+ ++R+ + + R A R L+ PP
Sbjct: 732 QSVPGAWPGASPLSSQPLSGSSR-QSHPLTQSRSGYIPSGHSLRTPEPAPRASLESVPPG 790
Query: 171 LEPPRSNYKPS*TLPVPQVDFHRAS 97
+Y+P L P DFH S
Sbjct: 791 RSYSPYDYQP--CLAGPNQDFHSKS 813
>U72391-1|AAC51287.1| 1461|Homo sapiens neogenin protein.
Length = 1461
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 386 WHCAVGSLPAILKRYRPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVRMPADGS 213
+H + + PA Y P PWP+ +S R+ T+S R T ST MPA S
Sbjct: 1265 FHSSSLASPARSHLYHPGSPWPIGTSMSLS---DRANSTESVR--NTPSTDTMPASSS 1317
>U61262-1|AAB17263.1| 1461|Homo sapiens neogenin protein.
Length = 1461
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 386 WHCAVGSLPAILKRYRPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVRMPADGS 213
+H + + PA Y P PWP+ +S R+ T+S R T ST MPA S
Sbjct: 1265 FHSSSLASPARSHLYHPGSPWPIGTSMSLS---DRANSTESVR--NTPSTDTMPASSS 1317
>BC117161-1|AAI17162.1| 1461|Homo sapiens neogenin homolog 1 (chicken)
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 386 WHCAVGSLPAILKRYRPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVRMPADGS 213
+H + + PA Y P PWP+ +S R+ T+S R T ST MPA S
Sbjct: 1265 FHSSSLASPARSHLYHPGSPWPIGTSMSLS---DRANSTESVR--NTPSTDTMPASSS 1317
>AB209412-1|BAD92649.1| 1130|Homo sapiens neogenin homolog 1 variant
protein.
Length = 1130
Score = 30.7 bits (66), Expect = 7.0
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -1
Query: 386 WHCAVGSLPAILKRYRPKHPWPVNICVSRKVRHPRSRPTQSARTGRTASTVRMPADGS 213
+H + + PA Y P PWP+ +S R+ T+S R T ST MPA S
Sbjct: 934 FHSSSLASPARSHLYHPGSPWPIGTSMSLS---DRANSTESVR--NTPSTDTMPASSS 986
>AK091259-1|BAC03622.1| 358|Homo sapiens protein ( Homo sapiens
cDNA FLJ33940 fis, clone CTONG2018069. ).
Length = 358
Score = 30.3 bits (65), Expect = 9.3
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = -1
Query: 287 PRSRPTQSARTGRTASTVRMPADGSAKRRDHASSTDRRDWSLRARTTNLPKPCLFHRL 114
P RP+Q A G +PA G KR+D R W+ T +L PC+FH L
Sbjct: 280 PSPRPSQVAPDG-------LPAQGGEKRKDAP-----RWWTSATTTLSLLLPCVFHDL 325
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,993,351
Number of Sequences: 237096
Number of extensions: 2025641
Number of successful extensions: 5697
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5689
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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