Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_I04
         (857 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.         33   1.8  
AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domai...    33   1.8  
AK131480-1|BAD18625.1|  325|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.    31   7.1  
AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.     31   7.1  
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen...    30   9.4  
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p...    30   9.4  
M11162-1|AAA75386.1|  138|Homo sapiens alpha-1 type I collagen p...    30   9.4  
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.                 30   9.4  
D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.           30   9.4  
BX538231-1|CAD98074.1|  530|Homo sapiens hypothetical protein pr...    30   9.4  
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha...    30   9.4  
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen...    30   9.4  
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ...    30   9.4  
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.     30   9.4  
AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.         30   9.4  

>AF091395-1|AAC43042.1| 3038|Homo sapiens Trio isoform protein.
          Length = 3038

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 382  SPRPVTPPGGAEP*AGTSGPPQR-PGAQAQ 296
            +P P  PP GA P AG S P +R PGA A+
Sbjct: 2312 TPGPSLPPPGAAPEAGPSAPSRRPPGADAE 2341


>AB209754-1|BAD92991.1| 2202|Homo sapiens triple functional domain
            (PTPRF interacting) variant protein.
          Length = 2202

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 382  SPRPVTPPGGAEP*AGTSGPPQR-PGAQAQ 296
            +P P  PP GA P AG S P +R PGA A+
Sbjct: 2010 TPGPSLPPPGAAPEAGPSAPSRRPPGADAE 2039


>AK131480-1|BAD18625.1|  325|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16652 fis, clone TESTI4036767. ).
          Length = 325

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = -3

Query: 381 APARSPLRAVQSREQGHQDHHRGP---APRHSEKHSASEADRAER 256
           AP R P      R+  H+   RGP   AP+ S +H A + D   R
Sbjct: 91  APQRDPTHRAPQRDPTHRAPQRGPRHRAPQRSPRHRAPQRDPTHR 135


>AF347693-1|AAQ15051.1| 1538|Homo sapiens multiple asters 1 protein.
          Length = 1538

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -1

Query: 377 PPGHPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 207
           PP  PS   R+    S+     T   R G AR++R P+P+    C R+ S        P+
Sbjct: 708 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 767

Query: 206 R 204
           R
Sbjct: 768 R 768


>AB014522-1|BAA31597.1| 1289|Homo sapiens KIAA0622 protein protein.
          Length = 1289

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -1

Query: 377 PPGHPSGRCRAV---SRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPS 207
           PP  PS   R+    S+     T   R G AR++R P+P+    C R+ S        P+
Sbjct: 459 PPVTPSSEKRSKIPRSQGCSRETSPNRIGLARSSRIPRPSMSQGCSRDTSRESSRDTSPA 518

Query: 206 R 204
           R
Sbjct: 519 R 519


>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602


>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
           protein.
          Length = 1069

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602


>M11162-1|AAA75386.1|  138|Homo sapiens alpha-1 type I collagen
           protein.
          Length = 138

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 68  PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 115


>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
          Length = 1040

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 131 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 178


>D86425-1|BAA13087.1| 1376|Homo sapiens osteonidogen protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +3

Query: 177 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 320
           +WT   P  SR   P+  R      A A+ C  RTP     AW P +C
Sbjct: 95  MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141


>BX538231-1|CAD98074.1|  530|Homo sapiens hypothetical protein
           protein.
          Length = 530

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 267 CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 368
           CR  TP++SR   +P   G  GPD+ +H  A P G+
Sbjct: 478 CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 513


>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
           protein.
          Length = 1464

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 555 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 602


>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
           protein.
          Length = 1461

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 552 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 599


>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
           precursor variant protein.
          Length = 1467

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -2

Query: 364 PPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*AFAAGSAQRRPVTG 218
           PPG A    G  GPP  PGA+ Q   +G    +  A   G A  R V G
Sbjct: 558 PPGPAGQ-DGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPG 605


>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
          Length = 1135

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
 Frame = +3

Query: 267  CRLRTPSVSRCAWAPGLCG--GPDVPAHGSAPPGGV 368
            CR  TP++SR   +P   G  GPD+ +H  A P G+
Sbjct: 956  CRPSTPALSRRTPSPSQGGYFGPDLYSHNKASPSGL 991


>AB009799-1|BAA24112.1| 1376|Homo sapiens osteonidogen protein.
          Length = 1376

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +3

Query: 177 VWTPSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAPGLC 320
           +WT   P  SR   P+  R      A A+ C  RTP     AW P +C
Sbjct: 95  MWTMISPPTSRPS-PLFWRTSTRATAEAESCTERTPPPQCWAWPPAMC 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,920,137
Number of Sequences: 237096
Number of extensions: 1566422
Number of successful extensions: 8398
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8352
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)