Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_G15
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.53 
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    25   1.2  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   2.2  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   8.7  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.7  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 596 RPDKASLYFPRIAKVLPELYAXSYVFS 516
           RPD   L  P + +V P+ Y  S +FS
Sbjct: 136 RPDTKDLPVPPLTEVFPDKYMDSGIFS 162


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 334 LKELRAQILYRLEQYQDCYNLYRDLLKNTTD 426
           LKE   +I +++E  +DC   + DLL    +
Sbjct: 516 LKEKENEIDFKIEVTEDCNKSFNDLLTQVAE 546


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = -2

Query: 626 LRTGLFGLSLRPDKASLYFPRIA 558
           L++G+FG++L P   +LY+  ++
Sbjct: 247 LQSGIFGMALSPLTQNLYYSALS 269


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 596 RPDKASLYFPRIAKVLPELYAXSYV 522
           R D  S+ FP + ++LP+ +  S V
Sbjct: 147 RQDTQSVIFPPVYEILPQHHLDSRV 171


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 60  KFCQSSDYERALKAAG 107
           +FCQ S Y++ L+  G
Sbjct: 76  EFCQDSGYDKILQVLG 91


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 554 LWQCGGSIMKLCQV 595
           +W C  SI+ LC +
Sbjct: 146 VWMCTASILNLCAI 159


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 60  KFCQSSDYERALKAAG 107
           +FCQ S Y++ L+  G
Sbjct: 76  EFCQDSGYDKILQVLG 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,731
Number of Sequences: 438
Number of extensions: 4117
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)