Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_E09
(866 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 62 6e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 57 2e-10
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 56 4e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 56 6e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 55 7e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 55 1e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 53 3e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 3e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 49 5e-08
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 48 1e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 47 2e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 44 2e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 40 4e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 2e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.003
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.018
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.042
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 26 0.39
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.90
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 62.1 bits (144), Expect = 6e-12
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Frame = +1
Query: 61 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 219
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 220 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 393
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 394 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
+ G V W + + + ++P D QTC K
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMK 162
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 58.0 bits (134), Expect = 1e-10
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Frame = +1
Query: 79 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 237
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 238 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 411
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 412 VSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
V W + + ++++P D QTC K
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 56.8 bits (131), Expect = 2e-10
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 7/143 (4%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 423
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 424 KRLDISTPISMQLDHWPNDMQTC 492
RL I M L+++P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.4 bits (130), Expect = 3e-10
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 10/152 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 243
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 414
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 415 SWIKRLDISTPISMQLDH--WPNDMQTCTFKV 504
+ TP+ + DH WP D+ CT +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHI 177
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.0 bits (129), Expect = 4e-10
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 330
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 331 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTF 498
PD+VL N A G+Y +R + + NG V W+ + ++ + ++P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 499 K 501
K
Sbjct: 168 K 168
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.6 bits (128), Expect = 6e-10
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 7/139 (5%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 444
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 445 PISMQLDHWPNDMQTCTFK 501
+ ++++P D QTC K
Sbjct: 152 SCEIDVEYFPFDEQTCVLK 170
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 7e-10
Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 270
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 271 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 435
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 436 ISTPISMQLDHWPNDMQTCTFKV 504
+ S+ ++ +P D+QTC K+
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKL 171
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 55.2 bits (127), Expect = 7e-10
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 12/162 (7%)
Frame = +1
Query: 52 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 210
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 211 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 384
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 385 ---RARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
+A + + G V W + + ++++P D QTC K
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMK 162
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 54.8 bits (126), Expect = 1e-09
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 12/144 (8%)
Frame = +1
Query: 106 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 264
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 265 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 429
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 430 LDISTPISMQLDHWPNDMQTCTFK 501
+ + ++++P D Q+C K
Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMK 175
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 53.6 bits (123), Expect = 2e-09
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V++NGS ++ + + + +P D Q C K
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 196
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 53.6 bits (123), Expect = 2e-09
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V++NGS ++ + + + +P D Q C K
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 196
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V++NGS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Frame = +1
Query: 160 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 336
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 337 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
+L N A + V S+ G V W+ + + ++ +P D Q C K
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V+++GS ++ + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMK 128
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V+++GS ++ + M + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMK 128
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMK 128
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMK 128
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 369
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 370 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
G Y V+++GS ++ + + + +P D Q C K
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMK 128
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 50.4 bits (115), Expect = 2e-08
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 222
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 396
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 397 SNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 501
NNG+ ++ + + + +P D Q C K
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMK 165
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.0 bits (114), Expect = 3e-08
Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Frame = +1
Query: 94 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 258
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 259 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 429
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 430 LDISTPISMQLDHWPNDMQTC 492
L I M+L ++P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 49.2 bits (112), Expect = 5e-08
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 406 GSVSWIKRLDISTPISMQLDHWPNDMQTCTFKV 504
GS++ RL I+ M L ++P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 48.0 bits (109), Expect = 1e-07
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 252
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 253 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 405
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 406 GSVSWIKRLDISTPISMQLDHWPNDMQTCTFKV 504
GS++ RL I+ M L ++P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 47.2 bits (107), Expect = 2e-07
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 264
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 265 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 429
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 430 LDISTPISMQLDHWPNDMQTCTFKV 504
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.0 bits (104), Expect = 5e-07
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 249
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 250 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 417
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 418 WIKRLDISTPISMQLDHWPNDMQTC 492
+ + + WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 264
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 265 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 429
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 430 LDISTPISMQLDHWPNDMQTCTFKV 504
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 43.6 bits (98), Expect = 2e-06
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +1
Query: 199 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 378
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 379 ALR---ARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKVRF*GCXIV 528
R R+S +GSV++ R + M L ++P D Q CT ++ G ++
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVL 187
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.5 bits (88), Expect = 4e-05
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +1
Query: 250 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 402
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 403 NGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKV 504
+GS++ RL I+ M L ++P D Q C ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 37.1 bits (82), Expect = 2e-04
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIKRLDISTPISMQLDHWPNDMQTCTFKV 504
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 37.1 bits (82), Expect = 2e-04
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIKRLDISTPISMQLDHWPNDMQTCTFKV 504
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 37.1 bits (82), Expect = 2e-04
Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 82 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 246
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 247 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 417
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 418 WIKRLDISTPISMQLDHWPNDMQTCTFKV 504
++ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 167 RIYRNGTVNYLMRRHLI 183
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 33.1 bits (72), Expect = 0.003
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Frame = +1
Query: 160 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 333
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 334 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKV 504
D ++ R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
Score = 21.8 bits (44), Expect = 8.4
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 56 QVRRNGNKNNISRRHFI 6
++ RNG N + RRH I
Sbjct: 218 RIYRNGTVNYLMRRHLI 234
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 30.7 bits (66), Expect = 0.018
Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 5/108 (4%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 369
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 370 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKV 504
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+ +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMI 150
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.5 bits (63), Expect = 0.042
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +1
Query: 160 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 321
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 322 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDHWPNDMQ 486
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 487 TC 492
C
Sbjct: 129 IC 130
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 26.2 bits (55), Expect = 0.39
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 560 YXIVXHEIHFVTIXHP*NRTLNVQVCMSL--GQWSNCIEIGVLMSKRF 423
Y E++F+ + R N+ +CM L G WS C++ V M + F
Sbjct: 228 YVSQWEEVYFLNMASVFMRIFNL-ICMMLLIGHWSGCLQFLVPMLQGF 274
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.90
Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = +1
Query: 316 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 486
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 487 TCTFKV 504
C ++
Sbjct: 176 ECKLQM 181
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 488 VCMSL--GQWSNCIEIGVLMSKRF 423
+CM L G WS C++ V M + F
Sbjct: 283 ICMMLLIGHWSGCLQFLVPMLQGF 306
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.8
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 303 PSAAAPLPCVPTQS 262
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,638
Number of Sequences: 438
Number of extensions: 4307
Number of successful extensions: 86
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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