Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_E02
(852 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces ... 30 0.36
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 29 0.84
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 29 1.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.1
SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger protein|Schiz... 29 1.1
SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr ... 28 1.5
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 27 2.6
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 3.4
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 4.5
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 26 5.9
SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual 26 7.8
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 26 7.8
SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyce... 26 7.8
SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase |Schizosaccharo... 26 7.8
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 7.8
>SPAC1D4.02c |||human GRASP protein homolog |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 533 PPSPGDLGYINPIIKSP-NSIHQPPQT*HPFPS 628
PP PGD+ + NP++ P + + QP +T + P+
Sbjct: 218 PPQPGDIVFSNPMLGGPDHKVSQPSETENFLPT 250
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 29.1 bits (62), Expect = 0.84
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Frame = +1
Query: 457 VEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPEFHTPTTPDLTSISINPL 636
+ NV TPS++ + ++ + H P + +P +HT D +SI+ +
Sbjct: 252 ISSTNVATTPSNTIFEMDDTLKADSSS----NEYHSPTNTLPSYHTEADLDNSSIASSNR 307
Query: 637 TPY*KE-FAPGLKPPLSSEAPSA--YLTPSSLGMAKGVRPLISVNDES--QASRLXSYSA 801
T + ++ + + +S SA TPSS + + +P +S + + + L S
Sbjct: 308 TQHTEDNYNKDVSDAQNSLGQSAVDLTTPSSPPIPRHTKPKLSTTQSTPVKPASLQSEED 367
Query: 802 IVLSY 816
I LS+
Sbjct: 368 IQLSF 372
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 673 PPLSSEAPSAYLTPSSLGMAKGVRPLISVNDESQ 774
PP++++ P +L P+S AK V P S N E++
Sbjct: 723 PPIATKKPPTFLKPNSPEYAKTVIPKSSTNLENE 756
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.1
Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 6/171 (3%)
Frame = +1
Query: 277 TGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSPKIPVTVDLCWTTADVT 456
T T S +T + +S+ Y + + + S P PVT C T+ V
Sbjct: 482 TSTPVTSTPLTTTNCTTSTSV--PYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 539
Query: 457 VEGVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPEFHTP--TTPDLTSISI- 627
V +TP ++ ++ + +T P S + P TP TT TS S+
Sbjct: 540 YTSTPVTSTPLATTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSVL 598
Query: 628 ---NPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVRPLISVNDES 771
P+T + + +S P + S + + + PL S N S
Sbjct: 599 YTSTPITSPNSTSSSSTQVSWNSTTPITGTSTSKVTSSTSI-PLTSTNRTS 648
Score = 27.5 bits (58), Expect = 2.6
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Frame = +1
Query: 289 TKSNSVTVQSLPNVSSIIKG--YRDAYLVNLEAVVFPSAPSPKIPVTVDLCWTTADVTVE 462
T +N T S+P S+ + +V + S P P+T C T+ +
Sbjct: 423 TTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSTPLTTTNCTTSTSIPYT 482
Query: 463 GVNVLATPSSSRITIGGLALMHQATLPWRSRLHQPDHQIPEFHTP--TTPDLTSISI 627
V +TP ++ ++ + +T P S + P TP TT TS S+
Sbjct: 483 STPVTSTPLTTTNCTTSTSVPYTST-PVTSSNYTISSSTPVTSTPVTTTNCTTSTSV 538
>SPCC1739.01 ||SPCC1906.05|zf-CCCH type zinc finger
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 547
Score = 28.7 bits (61), Expect = 1.1
Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 TGTETKSNSVTV-QSLPNVS--SIIKGYRDAYLVNLEAVVFPSAPSPKIPVTVDLCWTTA 447
TG +T+ QSL N+S S I R N A FPS S +P VDL
Sbjct: 308 TGVSLSRPRLTLDQSLGNLSLGSGINQRRQVPRSNSYAGAFPSVVSASLPTKVDLN-HQM 366
Query: 448 DVTVEGVNVLATPSSS 495
DV+ E L+TP S
Sbjct: 367 DVSDEEQRFLSTPLGS 382
>SPAC17G6.02c |||RTA1-like protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 324
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 WDDLFMEEIVPLXVSAASAIPSLVNAFSSSKPPQTD 111
W D+F + +P+ ++A IPSL A SK P T+
Sbjct: 239 WFDIF--DFIPMIFTSALLIPSLYPALERSKLPFTE 272
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 27.5 bits (58), Expect = 2.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 259 RLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD-AYLVNLEAVVFPSAPSPKI 414
R+Y L T ++S + PN S + +GY + A+L+N A V P +
Sbjct: 2840 RVYLPLVPTIQANSSADSSNPPNTSFLFRGYHETAWLINRFAHVARKHKLPSV 2892
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 522 YASSHPPLAISATSTRSSNP-RIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGSI 698
+ASSHP +S + S P +I + +L+I P AV + S +R I
Sbjct: 121 FASSHPDAIVSTEMVKESVPYKIDINENCKLDILHLSDPSAVSTPISPDY--SFPLRVPI 178
Query: 699 SVSHPLVT 722
++ PL T
Sbjct: 179 NIPPPLCT 186
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 477 QHIDSFNCDVSSSPTKVNCDWYFGARGG 394
QHI ++ +SSS + W FGA GG
Sbjct: 2027 QHIAAYVYAISSSTGSLYFAWNFGAEGG 2054
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 26.2 bits (55), Expect = 5.9
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
Frame = +1
Query: 595 PTTPDLTSISINPLTPY*KEFAPGLKPP--------LSSEAPS-AYLTPSSLGMAKGVRP 747
PT +S I L+P K+ + G +PP +S PS A+ + S+L + P
Sbjct: 152 PTRSTRSSSHIQSLSPESKQTSDGHRPPSPTSITTTSTSIDPSVAFSSKSTLATTRTNAP 211
Query: 748 LISVNDESQASRLXSYSAIVLSYLXICHTSY 840
L + ++AS L +SA+ H Y
Sbjct: 212 LSRPSQPTKASPLNKFSALEAIQSARSHARY 242
>SPAC22H10.11c ||||Schizosaccharomyces pombe|chr 1|||Manual
Length = 629
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/68 (22%), Positives = 33/68 (48%)
Frame = +3
Query: 516 RPYASSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSPDAVLEGVRAGVKASVVIRGS 695
+P+ S+ PL I++ SS+P+ ++ L + P ++ AG++ +GS
Sbjct: 88 KPFYSNKEPLKINSWKKSSSHPKSKEVSNGLLKV--STPPTEFVKRENAGIRRRSSNQGS 145
Query: 696 ISVSHPLV 719
++ P +
Sbjct: 146 FALEAPKI 153
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Frame = -2
Query: 416 GILGLGAEGKTTASRLTR------YASR*PFMMEETFGSDCTVTLFDLVS 285
GILGLG GKT A R Y +R P EE G++ V+ DL++
Sbjct: 160 GILGLGGIGKTMAKRARAFDMKIVYHNRTPLPEEEAEGAE-FVSFDDLLA 208
>SPCC330.04c |mug135||DUF1773 family protein 3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 357
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3
Query: 100 GVWKKRKH*PRREWPKRQKRXKAQF 26
G WKK + + EW K ++ KA++
Sbjct: 119 GEWKKAREEDKAEWKKAREEDKAEW 143
>SPBP4H10.11c |||long-chain-fatty-acid-CoA ligase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/59 (28%), Positives = 23/59 (38%)
Frame = +1
Query: 565 PDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGV 741
P + E T PD+ I+ + L KE PP + + T S G KGV
Sbjct: 205 PSEDLVELVKSTAPDVEIITYDNLLSLGKEKPQPPHPPKADDICCYMYTSGSTGKPKGV 263
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 528 SSHPPLAISATSTRSSNPRIPYTNHPRLNIHFHQSPDAVLE 650
S HP +IS T+T SS ++ P HF +P LE
Sbjct: 270 SEHPKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLE 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,329,939
Number of Sequences: 5004
Number of extensions: 69133
Number of successful extensions: 265
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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