Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_D23
(868 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 35 0.33
AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein. 32 3.1
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen ... 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 31 4.1
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 31 4.1
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 31 4.1
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 31 4.1
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 31 4.1
BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open read... 31 7.2
BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein. 31 7.2
AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK074056-1|BAB84882.1| 296|Homo sapiens FLJ00127 protein protein. 30 9.5
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 35.1 bits (77), Expect = 0.33
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 533 PPSPAISATSTRSSNPRIPYTNHPRLNIHFHQSPDAVLEGVR 658
P +P+ A+S + S P P + PR + +F Q P A ++G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437
>AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein.
Length = 785
Score = 31.9 bits (69), Expect = 3.1
Identities = 21/82 (25%), Positives = 37/82 (45%)
Frame = +3
Query: 519 PYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPS 698
P A++ + H P HQ H+P P+ ++++P P + P L+ P+S +
Sbjct: 132 PPAAAEQEVSLLSHSPHHQEAPVHSPEAPEKDPLTLSPTVPE-TDMDPLLQSPVSQKD-- 188
Query: 699 AYLTPSSLGMAKGVSPPLFSSE 764
TP + A PL ++E
Sbjct: 189 ---TPFQISSAVQKEQPLPTAE 207
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen
protein.
Length = 663
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 182 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 241
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 242 GEPAVLEPGML 252
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 212 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 271
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 272 GEPAVLEPGML 282
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 414
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 31.5 bits (68), Expect = 4.1
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +3
Query: 516 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 689
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 690 APSAYLTPSSL 722
A L P L
Sbjct: 300 GEPAVLEPGML 310
>BC033821-1|AAH33821.1| 616|Homo sapiens chromosome 16 open reading
frame 44 protein.
Length = 616
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 657 RTPSSTASGD*WKWMLSLGWLVYGIRGFDDRVDVAE 550
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 476 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 509
>BC032400-1|AAH32400.1| 553|Homo sapiens C16orf44 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 657 RTPSSTASGD*WKWMLSLGWLVYGIRGFDDRVDVAE 550
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 413 RRPMTTARG--WHSMCSLGDSIYSIGGSDDNIESME 446
>AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ44228 fis, clone THYMU3006371. ).
Length = 135
Score = 30.3 bits (65), Expect = 9.5
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 534 HPPLRSRLHQPDHQIPEFHTPTTPDLTSISIN--PLTPY*KEFAPGLKPPLSSEAP 695
HP + H H HTP+ P L S+ P +P + PG PP E+P
Sbjct: 66 HPNRHTHAHTHTHTHTHTHTPSFPLLLSLGTGAPPCSPCSTQ-PPGRSPPTFDESP 120
>AK074056-1|BAB84882.1| 296|Homo sapiens FLJ00127 protein protein.
Length = 296
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -2
Query: 657 RTPSSTASGD*WKWMLSLGWLVYGIRGFDDRVDVAE 550
R P +TA G W M SLG +Y I G DD ++ E
Sbjct: 156 RRPMTTARG--WHSMSSLGDSIYSIGGSDDNIESME 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,779,331
Number of Sequences: 237096
Number of extensions: 2846680
Number of successful extensions: 7944
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7932
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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