Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_D02
         (866 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024224-1|ABC86286.1|  923|Drosophila melanogaster LP13067p pro...    30   4.7  
U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.     29   6.3  
DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge spli...    29   6.3  
AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge prot...    29   6.3  
AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA...    29   6.3  

>BT024224-1|ABC86286.1|  923|Drosophila melanogaster LP13067p
           protein.
          Length = 923

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 232 SSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERLLHHKRLPRRV 363
           SS+ +  F+    R  WHR   E+  R    + L+H K   RRV
Sbjct: 106 SSSVEDLFANEAERRNWHRKTSEKRRRNARKKNLMHTKEKKRRV 149


>U47849-1|AAC47196.2|  829|Drosophila melanogaster Lozenge protein.
          Length = 829

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 481 HPFILSHY--YWRSRPYASSHP--PLRSRLHQPDHQIPDSIHQPPXNLTSIXINP 633
           H  +  HY  Y  + PY   HP  P     H P +  P +   PP  +TS   +P
Sbjct: 109 HHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSP 163


>DQ397338-1|ABD59005.1|  705|Drosophila melanogaster Lozenge splice
           variant protein.
          Length = 705

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 481 HPFILSHY--YWRSRPYASSHP--PLRSRLHQPDHQIPDSIHQPPXNLTSIXINP 633
           H  +  HY  Y  + PY   HP  P     H P +  P +   PP  +TS   +P
Sbjct: 109 HHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSP 163


>AF217651-2|AAF35308.1|  826|Drosophila melanogaster lozenge
           protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 481 HPFILSHY--YWRSRPYASSHP--PLRSRLHQPDHQIPDSIHQPPXNLTSIXINP 633
           H  +  HY  Y  + PY   HP  P     H P +  P +   PP  +TS   +P
Sbjct: 109 HHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSP 163


>AE014298-1325|AAF46486.2|  826|Drosophila melanogaster CG1689-PA
           protein.
          Length = 826

 Score = 29.5 bits (63), Expect = 6.3
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
 Frame = +1

Query: 481 HPFILSHY--YWRSRPYASSHP--PLRSRLHQPDHQIPDSIHQPPXNLTSIXINP 633
           H  +  HY  Y  + PY   HP  P     H P +  P +   PP  +TS   +P
Sbjct: 109 HHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPYPYPPAGPHPPAMVTSSSTSP 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,191,374
Number of Sequences: 53049
Number of extensions: 715036
Number of successful extensions: 2366
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2362
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)