Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_D02
         (866 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak k...    32   0.61 
U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak k...    32   0.61 
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr...    30   2.5  
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.      30   2.5  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.3  
U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical pr...    29   5.7  
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr...    29   5.7  
Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical pr...    28   9.9  

>U00046-6|AAN65305.1|  422|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform b protein.
          Length = 422

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERL 333
           G +++ F H  S+P LR +WHR Q       +T   L
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQTGMNRHGLTETEL 342


>U00046-5|AAC47047.4|  516|Caenorhabditis elegans Mammalian zak
           kinase homolog protein1, isoform a protein.
          Length = 516

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 223 GTVSSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERL 333
           G +++ F H  S+P LR +WHR Q       +T   L
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQTGMNRHGLTETEL 436


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 520 PYASSHPPLRSRLHQPDHQIPDS 588
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
            K04G2.8b protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 807  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 867  YLEPEPERRSHS 878


>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
            K04G2.8a protein.
          Length = 1186

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
          Length = 1186

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
 Frame = +1

Query: 226  TVSSTFDHPFSTPVLRSYWHRNQIEQCHRAITTERLLHH---KRLP--RRVSCQS*GCRF 390
            T S  + HP ++P+ +S  HR Q  +   A   +RLL       +P  R +S +  G + 
Sbjct: 805  TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864

Query: 391  SFRP*PQNTSHS 426
               P P+  SHS
Sbjct: 865  YLEPEPERRSHS 876


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 254 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 358
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>U70852-3|AAK29822.1|  836|Caenorhabditis elegans Hypothetical
           protein F45E4.3b protein.
          Length = 836

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 528 IKPPSPAISATSTRSSNPRFHTPTTPXLNIHXHQSPDAVLK 650
           ++PPSPA+SA S R    R+H PT    ++  HQS  +  K
Sbjct: 269 MQPPSPAVSAFSPR----RYHHPT----SVASHQSHPSTFK 301


>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
           protein F45E4.3a protein.
          Length = 1231

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +3

Query: 528 IKPPSPAISATSTRSSNPRFHTPTTPXLNIHXHQSPDAVLK 650
           ++PPSPA+SA S R    R+H PT    ++  HQS  +  K
Sbjct: 269 MQPPSPAVSAFSPR----RYHHPT----SVASHQSHPSTFK 301


>Z73424-5|CAA97782.3|  506|Caenorhabditis elegans Hypothetical
           protein C44B9.5 protein.
          Length = 506

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 2/119 (1%)
 Frame = +2

Query: 266 YFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVN--LEAVVFPSAPSLKIPVTVDLCW 439
           +F+   ++T +    +++  N SSI+     AY  +  L+  +  S P  K     +   
Sbjct: 222 FFEKNPSKTSNRDSKIENRSNSSSIMYNDPSAYSNDSILDDTIISSTPPDKSSFLAETMP 281

Query: 440 TTADVTVEGVNVLATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPXT*H 616
                        A P+SS  +I G  ++       DLG +  + K    Y + P T H
Sbjct: 282 LATPSPKNLTPKRALPTSSARSIFGHVVLPNPMKRKDLGVLAAVEKPEFDYPSSPITLH 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,374,189
Number of Sequences: 27780
Number of extensions: 335534
Number of successful extensions: 1014
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)