Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_C09
(897 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 4e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 3e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 56 4e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 52 9e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 51 1e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 4e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 5e-08
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 49 7e-08
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 49 7e-08
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 48 2e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 5e-07
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 42 8e-06
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 42 8e-06
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 42 8e-06
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 39 5e-05
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 36 7e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 33 0.005
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.043
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.94
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 1.2
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 22 6.6
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 59.7 bits (138), Expect = 4e-11
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +1
Query: 94 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 252
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 253 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 426
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 427 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 56.4 bits (130), Expect = 3e-10
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Frame = +1
Query: 112 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 276
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 277 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 447
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 448 SWIKRLDISTPISMQLDXWPNDMQTCTFXVRSRMPXSXEM 567
+ + WP D+ CT + S S E+
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 56.0 bits (129), Expect = 4e-10
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 285
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 286 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 456
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 457 KRLDISTPISMQLDXWPNDMQTC 525
RL I M L+ +P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 54.8 bits (126), Expect = 1e-09
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 270
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 444
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 445 VSWIKRLDISTPISMQLDXWPNDMQTC 525
V W + + ++ +P D QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 468
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 469 ISTPISMQLDXWPNDMQTCTFXVRS 543
+ S+ ++ +P D+QTC + S
Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.6 bits (123), Expect = 2e-09
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 12/160 (7%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 240
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 241 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 417
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 418 ----RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
+A + + G V W + + ++ +P D QTC
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 53.2 bits (122), Expect = 3e-09
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +1
Query: 190 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 363
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 364 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.4 bits (120), Expect = 5e-09
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.4 bits (120), Expect = 5e-09
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V++NGS ++ + + + +P D Q C
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.4 bits (120), Expect = 5e-09
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 477
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 478 PISMQLDXWPNDMQTC 525
+ ++ +P D QTC
Sbjct: 152 SCEIDVEYFPFDEQTC 167
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.0 bits (119), Expect = 7e-09
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 12/141 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 297
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 298 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 462
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPP 151
Query: 463 LDISTPISMQLDXWPNDMQTC 525
+ + ++ +P D Q+C
Sbjct: 152 AIYKSSCEINVEYFPFDEQSC 172
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 51.6 bits (118), Expect = 9e-09
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 222
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 223 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +1
Query: 193 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 369
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 370 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
+L N A + VS+ G V W+ + + ++ +P D Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 49.6 bits (113), Expect = 4e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 291
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 292 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 462
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 463 LDISTPISMQLDXWPNDMQTCTFXVRS 543
L I M+L +P D Q+C + S
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 49.2 bits (112), Expect = 5e-08
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 7/152 (4%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 255
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 256 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 429
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 430 SNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 525
NNG+ ++ + + + +P D Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.8 bits (111), Expect = 7e-08
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 222
++LL FLL + + + ++D++L YD P D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 223 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
+ I + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
+ + R+ NGSV + R+ ++ M L +P D Q C+ + S
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMAS 180
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 48.8 bits (111), Expect = 7e-08
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.6 bits (108), Expect = 2e-07
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 285
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 286 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 438
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 439 GSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.0 bits (104), Expect = 5e-07
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 8/145 (5%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 282
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 283 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 450
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 451 WIKRLDISTPISMQLDXWPNDMQTC 525
+ + + WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 42.7 bits (96), Expect = 4e-06
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 232 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 411
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 412 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 41.9 bits (94), Expect = 8e-06
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
R+ NG+V+++ R + +L+ +P D C+F + S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 41.9 bits (94), Expect = 8e-06
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
R+ NG+V+++ R + +L+ +P D C+F + S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 41.9 bits (94), Expect = 8e-06
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 10/173 (5%)
Frame = +1
Query: 55 TYIILLPFLLTCAIASAAE--CENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-L 213
T + +L LT AE E+ S ++D+LL + YD+ P + VN++ L
Sbjct: 34 TILCILTLALTLVTLVRAEDIFEDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVL 93
Query: 214 HLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLN 384
L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 94 LLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHG 153
Query: 385 AAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
R+ NG+V+++ R + +L+ +P D C+F + S
Sbjct: 154 DFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.1 bits (87), Expect = 5e-05
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 283 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 435
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 436 NGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRS 543
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 35.5 bits (78), Expect = 7e-04
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = +1
Query: 193 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 366
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 367 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVR 540
D ++ R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 541 S 543
S
Sbjct: 257 S 257
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 32.7 bits (71), Expect = 0.005
Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 5/120 (4%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 402
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 403 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTCTFXVRSRMPXSXEMDF 573
+ ++ + ++ ++ ++ +L + +M+ + +P+D Q C+ + S + ++ F
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 32.3 bits (70), Expect = 0.006
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 11/128 (8%)
Frame = +1
Query: 193 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 354
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 355 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDMQ 519
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 520 TCTFXVRS 543
C + S
Sbjct: 129 ICPIYIES 136
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.043
Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 349 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 519
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 520 TCTFXVRSRMPXSXEMDF 573
C + S + EM F
Sbjct: 176 ECKLQMESLSHTTDEMIF 193
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.94
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = -3
Query: 895 PPPXXQPXPPXNPXPXPPRXXXPPXXPXGXXRXPXNHPDE 776
P P P P P P PP P G P +P +
Sbjct: 25 PSPHQSPQAPQRGSPPNPSQGPPPGGPPG--APPSQNPSQ 62
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 336 PSAAAPLPCVPTQS 295
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 22.2 bits (45), Expect = 6.6
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 656 PPXPXXPPXHXHXSXTPNIP 597
PP PP H H + ++P
Sbjct: 96 PPTRKLPPLHPHTAMVTHLP 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,108
Number of Sequences: 438
Number of extensions: 5597
Number of successful extensions: 84
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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