Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP05_FL5_C07
(895 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 50 4e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 9e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 5e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 5e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 45 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 8e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 41 1e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.40
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.93
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 5.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 5.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 94 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 252
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 253 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 426
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 427 VSNNGSVSW 453
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 25.4 bits (53), Expect = 0.71
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D QTC KFGS ++ ++D
Sbjct: 153 PFDQQTCFMKFGSWTYDGIQID 174
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 7/136 (5%)
Frame = +1
Query: 118 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 285
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 286 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 456
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 457 KRLDISTPISMQLDNW 504
RL I M L+N+
Sbjct: 122 SRLTIKAGCPMNLENF 137
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.4 bits (110), Expect = 9e-08
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V++NGS ++
Sbjct: 153 GTYQTNVVVTHNGSCLYV 170
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 214
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 112 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 276
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 277 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 378
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +1
Query: 112 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 270
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 444
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 445 VSW 453
V W
Sbjct: 137 VEW 139
Score = 25.4 bits (53), Expect = 0.71
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D QTC KFGS ++ ++D
Sbjct: 157 PFDEQTCVMKFGSWTYDGFQVD 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Frame = +1
Query: 82 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 240
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 241 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 417
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 418 ----RARVSNNGSVSW 453
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 23.4 bits (48), Expect = 2.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D QTC KFGS ++ +D
Sbjct: 153 PFDEQTCFMKFGSWTYDGYTVD 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 5e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 402
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 403 GDYALRARVSNNGSVSWI 456
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
Score = 25.0 bits (52), Expect = 0.93
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ +++D L+ E
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVDLVLSSE 146
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.0 bits (104), Expect = 5e-07
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 297
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 298 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D Q+C KFGS +N ++D
Sbjct: 166 PFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 453
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 25.0 bits (52), Expect = 0.93
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D QTC KFGS ++ ++D
Sbjct: 161 PFDEQTCVLKFGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 369
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 370 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 456
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.8 bits (101), Expect = 1e-06
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 255
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 256 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 429
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 430 SNNGSVSWI 456
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMDS*LTKE 589
P D Q C KFGS ++ ++D L E
Sbjct: 156 PFDDQRCEMKFGSWTYDGFQLDLQLQDE 183
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 44.4 bits (100), Expect = 1e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +1
Query: 190 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 363
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 364 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 456
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 28.3 bits (60), Expect = 0.10
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 497 TIGPNDMQTCTFKFGSRMHNSDEM 568
T P D QTC KFGS N D++
Sbjct: 156 TYFPFDQQTCIMKFGSWTFNGDQV 179
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 8e-06
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Frame = +1
Query: 127 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 291
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 292 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 462
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 463 LDISTPISMQLDNW 504
L I M+L N+
Sbjct: 156 LTIKAKCPMELRNF 169
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.9 bits (94), Expect = 8e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 303
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 304 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 453
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDEMD 571
P D+QTC K GS ++ ++D
Sbjct: 161 PYDVQTCVLKLGSWTYDGFKVD 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.1 bits (92), Expect = 1e-05
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Frame = +1
Query: 61 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 222
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 223 H-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAA 393
A I + + +Q + W+D+RL +N G T L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKE 127
Query: 394 TTAGDYAL---RARVSNNGSVSWIKR--LDISTPISMQL 495
+ + R+ NGSV + R L +S P++++L
Sbjct: 128 GHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKL 166
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 39.5 bits (88), Expect = 4e-05
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 8/138 (5%)
Frame = +1
Query: 115 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 282
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 283 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 450
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 451 WIKRLDISTPISMQLDNW 504
+ + + +W
Sbjct: 159 CVPSVKHVAKCATDFSSW 176
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.40
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 467 TLALQFLCS*TIGPNDMQTCTFKFGSRMHNSDEM 568
TL L + I P+D Q C + S H +DEM
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.93
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 58 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 162
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 5.0
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 193 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 354
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 355 LWRPDVVLLNA 387
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 5.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 336 PSAAAPLPCVPTQS 295
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,054
Number of Sequences: 438
Number of extensions: 5835
Number of successful extensions: 80
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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