Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_C02
         (915 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071331-1|AAL48953.1|  136|Drosophila melanogaster RE35023p pro...    29   8.9  
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro...    29   8.9  
AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    29   8.9  
AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protei...    29   8.9  
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei...    29   8.9  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.9  
AE014297-2575|AAF55590.1|  218|Drosophila melanogaster CG7715-PA...    29   8.9  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.9  

>AY071331-1|AAL48953.1|  136|Drosophila melanogaster RE35023p
           protein.
          Length = 136

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 537 PPLRSRLHQPDHQSRFIHQHQXXHSH 614
           PP+ S L QP+ ++   H+HQ  H H
Sbjct: 19  PPVISALSQPEAETPEHHEHQEHHEH 44


>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
          Length = 2409

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 498  HYYWRSRPYASSHPPLRSRLHQPDHQSRFIHQHQXXHSHPXD 623
            H    SR Y   HP L     +  H +   HQHQ  H HP +
Sbjct: 1711 HAPGHSRDYHRRHPNLPDPFTE-HHPNSSPHQHQHHHRHPHE 1751


>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
            protein.
          Length = 2382

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 498  HYYWRSRPYASSHPPLRSRLHQPDHQSRFIHQHQXXHSHPXD 623
            H    SR Y   HP L     +  H +   HQHQ  H HP +
Sbjct: 1684 HAPGHSRDYHRRHPNLPDPFTE-HHPNSSPHQHQHHHRHPHE 1724


>AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1449

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 498 HYYWRSRPYASSHPPLRSRLHQPDHQSRFIHQHQXXHSHPXD 623
           H    SR Y   HP L     +  H +   HQHQ  H HP +
Sbjct: 751 HAPGHSRDYHRRHPNLPDPFTE-HHPNSSPHQHQHHHRHPHE 791


>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1462

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 498 HYYWRSRPYASSHPPLRSRLHQPDHQSRFIHQHQXXHSHPXD 623
           H    SR Y   HP L     +  H +   HQHQ  H HP +
Sbjct: 764 HAPGHSRDYHRRHPNLPDPFTE-HHPNSSPHQHQHHHRHPHE 804


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014297-2575|AAF55590.1|  218|Drosophila melanogaster CG7715-PA
           protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 537 PPLRSRLHQPDHQSRFIHQHQXXHSH 614
           PP+ S L QP+ ++   H+HQ  H H
Sbjct: 101 PPVISALSQPEAETPEHHEHQEHHEH 126


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,068,169
Number of Sequences: 53049
Number of extensions: 579639
Number of successful extensions: 2980
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2913
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)