Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_C01
         (939 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor de...    33   1.1  
BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor, n...    33   1.1  
BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor, n...    33   1.1  
AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.              33   1.1  
X01715-1|CAA25861.1|  520|Homo sapiens acetylcholine receptor ga...    31   8.0  
BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.        31   8.0  
AC092165-3|AAY24103.1|  520|Homo sapiens unknown protein.              31   8.0  

>X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor delta
           subunit protein.
          Length = 517

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 174 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 314
           +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 174 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 314
           +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 174 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 314
           +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.
          Length = 517

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 174 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGEWG 314
           +  + V L L L +  +++E E T+     ++  W D RL WNA E+G
Sbjct: 49  EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>X01715-1|CAA25861.1|  520|Homo sapiens acetylcholine receptor gamma
           chain precursor protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +3

Query: 129 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 293
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 32  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91

Query: 294 WNAGEW 311
           W+  ++
Sbjct: 92  WDPRDY 97


>BC111802-1|AAI11803.1|  465|Homo sapiens CHRNG protein protein.
          Length = 465

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +3

Query: 129 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 293
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 29  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88

Query: 294 WNAGEW 311
           W+  ++
Sbjct: 89  WDPRDY 94


>AC092165-3|AAY24103.1|  520|Homo sapiens unknown protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 8.0
 Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
 Frame = +3

Query: 129 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTVRIQADLQMNWIDKRLS 293
           ++  L+  YD +  P  +   VVN++L L   N+    E E  +     ++M W D RL 
Sbjct: 32  LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91

Query: 294 WNAGEW 311
           W+  ++
Sbjct: 92  WDPRDY 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,963,512
Number of Sequences: 237096
Number of extensions: 1860729
Number of successful extensions: 4057
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4054
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12325533684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)