Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP05_FL5_B08
         (862 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    24   2.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.3  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 430 TGFPVLRRTLGIVDWCTVLRGSH*G 356
           TGF  L   +G+   CT++ G H G
Sbjct: 201 TGFEELAYKMGLESTCTLILGRHLG 225


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 325 ATMKSGNADVYLNEIPGGQY 384
           A +K  N   YLN+I GGQ+
Sbjct: 73  ARLKFSNIAPYLNQIYGGQF 92


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 220 LQGTPLDTKIPLQKVSEYSAYWEQART 300
           +QG P+  +IP  K  E  A W   +T
Sbjct: 326 MQGNPICVQIPWDKNVEALAKWANGQT 352


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 498 WSNFDYITQEEICFPVSF 445
           WS+F Y+  E  C   SF
Sbjct: 115 WSHFPYVFGEAFCIIQSF 132


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,181
Number of Sequences: 438
Number of extensions: 4457
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)