Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P24
         (826 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   6.0  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   6.0  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.9  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.9  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 238 NNTACSANCSAGGEECGLGS--GCPSEQTHF 152
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 238 NNTACSANCSAGGEECG 188
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 499 KCTCDDGYRLSPEDP 455
           +C CD GY  + +DP
Sbjct: 295 ECRCDPGYFRAEKDP 309


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 238 NNTACSANCSAGGEECG 188
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 367 RNDTNSNVCYKKCDGACE 314
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 367 RNDTNSNVCYKKCDGACE 314
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,957
Number of Sequences: 438
Number of extensions: 4083
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)