Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P22
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071047-1|AAL48669.1|  327|Drosophila melanogaster RE13606p pro...   163   3e-40
AE014296-2122|AAF49936.1|  327|Drosophila melanogaster CG10335-P...   163   3e-40
M12896-1|AAA28734.1|  381|Drosophila melanogaster protein ( D.me...    31   2.5  
BT003450-1|AAO39453.1|  381|Drosophila melanogaster RH44056p pro...    31   2.5  
AE014297-2590|AAF55601.1|  381|Drosophila melanogaster CG16740-P...    31   2.5  
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl...    30   4.4  

>AY071047-1|AAL48669.1|  327|Drosophila melanogaster RE13606p
           protein.
          Length = 327

 Score =  163 bits (395), Expect = 3e-40
 Identities = 82/175 (46%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
 Frame = -1

Query: 706 YAKLXSWX-APSDMMANRXKQSKGGLVRNKLPNRVSILSXSCKFASSMYGPFRDTMKSSP 530
           YAK  +   APSDMM NR K  K  L+  ++ N VS+L+ S KF S+ YGPFR+  +S+P
Sbjct: 154 YAKAGAHIVAPSDMMDNRVKAIKQALIDAQM-NSVSLLAYSAKFTSNFYGPFREAAQSAP 212

Query: 529 MEGDRKCYQLPPGSXXXXXXXXXXXXXXXADFLMVKPGLPYLDIVRQTKDRFPHHPLFIY 350
             GDR+CYQLP GS               AD LMVKPG+PYLDI+R TKD +P+H L++Y
Sbjct: 213 KFGDRRCYQLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTKDSYPYHTLYVY 272

Query: 349 QVSGEYELISRSGDRAS--MQTNLMEILTCMRRAGADCIITYFAPLILSIISEKK 191
           QVSGE+ ++  +    +  ++  ++E +   RRAGADCIITY+ P +L II + K
Sbjct: 273 QVSGEFAMLYHAAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLLDIIGKVK 327


>AE014296-2122|AAF49936.1|  327|Drosophila melanogaster CG10335-PA
           protein.
          Length = 327

 Score =  163 bits (395), Expect = 3e-40
 Identities = 82/175 (46%), Positives = 112/175 (64%), Gaps = 3/175 (1%)
 Frame = -1

Query: 706 YAKLXSWX-APSDMMANRXKQSKGGLVRNKLPNRVSILSXSCKFASSMYGPFRDTMKSSP 530
           YAK  +   APSDMM NR K  K  L+  ++ N VS+L+ S KF S+ YGPFR+  +S+P
Sbjct: 154 YAKAGAHIVAPSDMMDNRVKAIKQALIDAQM-NSVSLLAYSAKFTSNFYGPFREAAQSAP 212

Query: 529 MEGDRKCYQLPPGSXXXXXXXXXXXXXXXADFLMVKPGLPYLDIVRQTKDRFPHHPLFIY 350
             GDR+CYQLP GS               AD LMVKPG+PYLDI+R TKD +P+H L++Y
Sbjct: 213 KFGDRRCYQLPSGSRSLAMRAIQRDVAEGADMLMVKPGMPYLDILRSTKDSYPYHTLYVY 272

Query: 349 QVSGEYELISRSGDRAS--MQTNLMEILTCMRRAGADCIITYFAPLILSIISEKK 191
           QVSGE+ ++  +    +  ++  ++E +   RRAGADCIITY+ P +L II + K
Sbjct: 273 QVSGEFAMLYHAAKAGAFDLKDAVLEAMKGFRRAGADCIITYYTPFLLDIIGKVK 327


>M12896-1|AAA28734.1|  381|Drosophila melanogaster protein (
           D.melanogaster opsingene Rh2, complete cds. ).
          Length = 381

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 252 PALLMHVRISIRLVCMLA-RSPLLDINSYSPDTWYMNKGWC 371
           PA L+ + ++    CM+A +SP++ IN Y  +TW +   WC
Sbjct: 91  PANLLVLNLAFSDFCMMASQSPVMIINFYY-ETWVLGPLWC 130


>BT003450-1|AAO39453.1|  381|Drosophila melanogaster RH44056p
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 252 PALLMHVRISIRLVCMLA-RSPLLDINSYSPDTWYMNKGWC 371
           PA L+ + ++    CM+A +SP++ IN Y  +TW +   WC
Sbjct: 91  PANLLVLNLAFSDFCMMASQSPVMIINFYY-ETWVLGPLWC 130


>AE014297-2590|AAF55601.1|  381|Drosophila melanogaster CG16740-PA
           protein.
          Length = 381

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 252 PALLMHVRISIRLVCMLA-RSPLLDINSYSPDTWYMNKGWC 371
           PA L+ + ++    CM+A +SP++ IN Y  +TW +   WC
Sbjct: 91  PANLLVLNLAFSDFCMMASQSPVMIINFYY-ETWVLGPLWC 130


>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
            single-stranded nucleicacid binding protein protein.
          Length = 1043

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 349  QVSGEYELISRSGDRASMQTNLMEILTCMRRAGADC 242
            ++SGE  L++R         NL+EI+T + R G DC
Sbjct: 994  ELSGEQYLLNRIEGMEKKINNLLEIVTRLLRQGKDC 1029


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,244,699
Number of Sequences: 53049
Number of extensions: 667387
Number of successful extensions: 1773
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1766
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)