Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P22
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-10|CAA86060.4|  267|Caenorhabditis elegans Hypothetical p...    28   9.2  
U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical pr...    28   9.2  

>Z37983-10|CAA86060.4|  267|Caenorhabditis elegans Hypothetical
           protein B0393.7 protein.
          Length = 267

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 312 PLLDINSYSPDTWYMNKGWCGKRSLVC 392
           PL+ +   +PD   M+  WCG+ +++C
Sbjct: 51  PLVAVRDCTPDCPNMSDEWCGQGTILC 77


>U00048-6|AAB53828.1|  873|Caenorhabditis elegans Hypothetical
           protein C05D11.8 protein.
          Length = 873

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = -3

Query: 203 IRKEVINVKYIICKWWKYIHIYNKYSFIVIAGISSTETVVIVLLN 69
           + K ++N  + +C+W++   IY + S       S  E + ++LLN
Sbjct: 138 VHKPILNPLFRLCEWFQRADIYWRVSKSENKKTSEAEKMFVLLLN 182


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,892,127
Number of Sequences: 27780
Number of extensions: 323608
Number of successful extensions: 1146
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1143
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)