Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P19
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.2  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.2  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.2  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   9.5  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   9.5  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   9.5  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   9.5  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 75  LNPLFFTVLGC*FRRA 28
           LNPL +T+    +RRA
Sbjct: 376 LNPLIYTIFNLDYRRA 391


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 75  LNPLFFTVLGC*FRRA 28
           LNPL +T+    +RRA
Sbjct: 376 LNPLIYTIFNLDYRRA 391


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 75  LNPLFFTVLGC*FRRA 28
           LNPL +T+    +RRA
Sbjct: 376 LNPLIYTIFNLDYRRA 391


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 651 PTTPDLTSISINPPDAV 601
           P TPD   +  N PDA+
Sbjct: 55  PCTPDAAELKRNLPDAL 71


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 533 PSSLGMXKGVSPPYFQVNDESQASRLIS 450
           P+S+G+   VS P F+V    Q +  IS
Sbjct: 174 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 201


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 651 PTTPDLTSISINPPDAV 601
           P TPD   +  N PDA+
Sbjct: 55  PCTPDAAELKRNLPDAL 71


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 533 PSSLGMXKGVSPPYFQVNDESQASRLIS 450
           P+S+G+   VS P F+V    Q +  IS
Sbjct: 113 PNSVGVSNEVSLPQFKVLGHRQRAMEIS 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,928
Number of Sequences: 438
Number of extensions: 5046
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)