Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P18
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical pr...    33   0.18 
AC017117-6|AAF16615.1|  201|Caenorhabditis elegans Hypothetical ...    30   1.7  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    28   9.1  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    28   9.1  

>Z72514-1|CAA96674.1|  428|Caenorhabditis elegans Hypothetical
           protein T10B10.1 protein.
          Length = 428

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -1

Query: 709 PXXGXSATSTPIIXSPGFPYTNHPQT*HPFPSIP*RRTRREFAPGLKPPLSSEAPS-AYL 533
           P     A  +P   SP +P  ++P   +P PS P      E A  + PP   E PS  Y 
Sbjct: 355 PAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSYPAEPAYSVPPPAKPEQPSGGYD 414

Query: 532 TPS 524
            PS
Sbjct: 415 APS 417


>AC017117-6|AAF16615.1|  201|Caenorhabditis elegans Hypothetical
           protein F43C11.4 protein.
          Length = 201

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 9/61 (14%)
 Frame = -3

Query: 689 YINPDHXIPRI-------SIHQPP--PDLTSISINPLTPY*KGIRAGVKASVVIRGSISV 537
           ++ P+  +PR+       SI  PP   D TS  I P  PY  GI       +V  GS++V
Sbjct: 109 FVCPEDFVPRVVSTFSRSSIETPPGFTDFTSFIIQPPEPYDAGINTIDYFGIVCDGSLAV 168

Query: 536 S 534
           S
Sbjct: 169 S 169


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 565  PLSSEAPSAYLTPSSLGMXKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = -1

Query: 565  PLSSEAPSAYLTPSSLGMXKGVSPP 491
            P+++EAP+A   PS   + +G SPP
Sbjct: 1203 PVAAEAPAAAAAPSRARVPRGPSPP 1227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,318,843
Number of Sequences: 27780
Number of extensions: 367405
Number of successful extensions: 1014
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)