Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_P17
(1156 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 7e-05
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 39 0.002
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.072
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.075
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 0.35
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.70
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 0.93
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.93
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 28 2.8
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.8
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.9
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 6.5
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 8.9
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 7e-05
Identities = 15/23 (65%), Positives = 15/23 (65%)
Frame = -2
Query: 117 PPPPXPPXXXXXXXPPPPPPPPP 49
PPPP PP PPPPPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 37.5 bits (83), Expect = 0.003
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPP-PXPPXXXXXXXPPPPPPPPPXXXXXXXXXXPP 13
P P P P P P PP PPPPPPPP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.1 bits (67), Expect = 0.30
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 120 TPPPPXPPXXXXXXXPPPPPPPPPXXXXXXXXXXPP 13
+PPPP P P P P PPP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = -3
Query: 248 PTPPPPPXXPXXXXPHXXXXPPXXXXPXXXXPPXXHXXNXPXRXPRPPXPP 96
P PPPP P PP PP P PP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPPPXPPXXXXXXXPPPPP 61
P P P PPPP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/51 (29%), Positives = 16/51 (31%), Gaps = 1/51 (1%)
Frame = -3
Query: 245 TPPPPPXXPXXXXPHXXXXPPXXXXP-XXXXPPXXHXXNXPXRXPRPPXPP 96
+PPPPP P P P PP P PP PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 129 PRXTPPPPXPPXXXXXXXPPPPPPPP 52
P PPPP PP PPPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 73 PPPPPPPPXXXXXXXXXXPP 14
PPPPPPPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 144 PRXEXPRXTPPPPXPPXXXXXXXPPPPPPP 55
P P PPP P PPPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEP----PSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 75 PPPPPPPPPXXXXXXXXXXPP 13
PPPPPPPP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.5 bits (63), Expect(2) = 0.072
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 75 PPPPPPPPP 49
PPPPPPPPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.2 bits (45), Expect(2) = 0.072
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 129 PRXTPPPPXPP 97
P PPPP PP
Sbjct: 942 PAFPPPPPPPP 952
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.075
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 10/45 (22%)
Frame = -2
Query: 117 PPPPXPPXXXXXXXPP----------PPPPPPPXXXXXXXXXXPP 13
PPPP PP PP PPPPPPP PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPP 355
Score = 28.7 bits (61), Expect = 1.6
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 6/41 (14%)
Frame = -2
Query: 117 PPPPXPP-XXXXXXXPPPP-----PPPPPXXXXXXXXXXPP 13
PPPP PP P PP PPPPP PP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPP 377
Score = 27.9 bits (59), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 120 TPPPPXPPXXXXXXXPPPPPPPPP 49
TPP P PP P PP PP
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPP--PPXPPXXXXXXXPPPPPPPPP 49
P+ P P + P PP PP PP PP P
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect(2) = 0.35
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 75 PPPPPPPP 52
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 73 PPPPPPPP 50
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 22.6 bits (46), Expect(2) = 0.35
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 129 PRXTPPPPXPP 97
P PPPP PP
Sbjct: 1091 PSAVPPPPPPP 1101
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.70
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = -2
Query: 129 PRXTPPPPXPPXXXXXXX--PPPPPPPPP 49
P PP P PPPPPPPPP
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 28.7 bits (61), Expect = 1.6
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPPPXPP 97
PT P+ P PPPP PP
Sbjct: 225 PTYTPKQADPLPAPPPPPPP 244
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 114 PPPXPPXXXXXXXPPPPPPPP 52
PP P PPPPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Frame = -2
Query: 117 PPPPXPPXXXXXXXPPPPPPP--PP 49
PP P PPPPPPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPP 248
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 29.5 bits (63), Expect = 0.93
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 75 PPPPPPPPP 49
PPPPPPPPP
Sbjct: 306 PPPPPPPPP 314
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 0.93
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 129 PRXTPPPPXPPXXXXXXXPPPPPP 58
P+ TP PP P PPPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
Score = 27.5 bits (58), Expect = 3.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 127 PXDXPAPPXPXXXXXXXXPPPPPP 56
P PAPP P PPPPP
Sbjct: 725 PQVTPAPPTPAPTPAVKHHPPPPP 748
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPPPXPPXXXXXXXPPPPPPPP 52
PT P P PPPP P PPPP P
Sbjct: 1705 PTPPP---PPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Frame = -2
Query: 144 PRXEXPRXTPPP---PXPPXXXXXXXPPP--PPPPPP 49
P+ P PPP P PP PP PPPP P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -3
Query: 248 PTPPPPPXXPXXXXPHXXXXPPXXXXPXXXXPPXXHXXNXPXRXPRP 108
PTPPPPP P PP P PP + P P P
Sbjct: 1705 PTPPPPP----MSVPPPPSAPPMPAGPPSAPPPPLPASSAP-SVPNP 1746
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 127 PXDXPAPPXPXXXXXXXXPPPPPPPP 50
P PP P PP PPPP
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 53 GGGGGGGGXXXXXXXGGXGGGGVXRGXSXRGS 148
GG GG GG G G GG G RGS
Sbjct: 457 GGRGGFGGRGGFGGGRGRGRGGARSGNPNRGS 488
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 50 GGGGGGGGGXXXXXXXGGXGGGGVXRG 130
GGG GG G GG GG G RG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARG 55
Score = 26.2 bits (55), Expect = 8.6
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 50 GGGGGG--GGGXXXXXXXGGXGGGGVXRGXSXRGSXV 154
GGG GG GG GG GG RG + G+ V
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.8
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPPPXPPXXXXXXXPPPPPPP 55
P P P PP PP PP PPP
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = -3
Query: 233 PPXXPXXXXPHXXXXPPXXXXPXXXXPPXXHXXNXPXRXPRPPXP 99
PP P P PP P PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 26.6 bits (56), Expect = 6.5
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = -2
Query: 156 PTXXPRXEXPRXTPPPPXPPXXXXXXXPPPPPPPPP 49
PT P PP P P PP P PP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 75 PPPPPPPP 52
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 6.5
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 72 PPPPPPPP 49
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 23.0 bits (47), Expect(2) = 8.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -2
Query: 75 PPPPPPPPP 49
PPPP PP P
Sbjct: 222 PPPPAPPKP 230
Score = 21.4 bits (43), Expect(2) = 8.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2
Query: 129 PRXTPPPPXPP 97
P PPPP PP
Sbjct: 218 PVKKPPPPAPP 228
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,002,576
Number of Sequences: 5004
Number of extensions: 15122
Number of successful extensions: 546
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 617576420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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