Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P16
         (838 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S47947-1|AAB24059.1|  327|Drosophila melanogaster distal-less pr...    31   2.6  
BT030126-1|ABN49265.1|  347|Drosophila melanogaster IP14437p pro...    31   2.6  
AY113370-1|AAM29375.1|  128|Drosophila melanogaster LP01770p pro...    31   2.6  
AE013599-3964|AAF47280.1|  322|Drosophila melanogaster CG3629-PB...    31   2.6  
AE013599-3963|AAF47279.1|  327|Drosophila melanogaster CG3629-PA...    31   2.6  

>S47947-1|AAB24059.1|  327|Drosophila melanogaster distal-less
           protein.
          Length = 327

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 693 GFRXHQPDHQIPGFHTPTTPDLTSIPINPLTPY*KEFAP-GLKPPLSSEAP 544
           G     P H +P  H+PT    +S P++ L+P   EF P GL PP  ++AP
Sbjct: 221 GSNSGSPSHYLPPGHSPTP---SSTPVSELSP---EFPPTGLSPP--TQAP 263


>BT030126-1|ABN49265.1|  347|Drosophila melanogaster IP14437p
           protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 693 GFRXHQPDHQIPGFHTPTTPDLTSIPINPLTPY*KEFAP-GLKPPLSSEAP 544
           G     P H +P  H+PT    +S P++ L+P   EF P GL PP  ++AP
Sbjct: 246 GSNSGSPSHYLPPGHSPTP---SSTPVSELSP---EFPPTGLSPP--TQAP 288


>AY113370-1|AAM29375.1|  128|Drosophila melanogaster LP01770p
           protein.
          Length = 128

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 693 GFRXHQPDHQIPGFHTPTTPDLTSIPINPLTPY*KEFAP-GLKPPLSSEAP 544
           G     P H +P  H+PT    +S P++ L+P   EF P GL PP  ++AP
Sbjct: 27  GSNSGSPSHYLPPGHSPTP---SSTPVSELSP---EFPPTGLSPP--TQAP 69


>AE013599-3964|AAF47280.1|  322|Drosophila melanogaster CG3629-PB,
           isoform B protein.
          Length = 322

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 693 GFRXHQPDHQIPGFHTPTTPDLTSIPINPLTPY*KEFAP-GLKPPLSSEAP 544
           G     P H +P  H+PT    +S P++ L+P   EF P GL PP  ++AP
Sbjct: 221 GSNSGSPSHYLPPGHSPTP---SSTPVSELSP---EFPPTGLSPP--TQAP 263


>AE013599-3963|AAF47279.1|  327|Drosophila melanogaster CG3629-PA,
           isoform A protein.
          Length = 327

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 693 GFRXHQPDHQIPGFHTPTTPDLTSIPINPLTPY*KEFAP-GLKPPLSSEAP 544
           G     P H +P  H+PT    +S P++ L+P   EF P GL PP  ++AP
Sbjct: 221 GSNSGSPSHYLPPGHSPTP---SSTPVSELSP---EFPPTGLSPP--TQAP 263


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,840,389
Number of Sequences: 53049
Number of extensions: 801084
Number of successful extensions: 2249
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)