Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_P14
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical p... 101 6e-22
Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 30 1.7
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 30 1.7
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 30 1.7
AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protei... 29 3.9
AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN phosphat... 29 3.9
AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein. 29 3.9
AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dau... 29 3.9
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 28 8.9
>U28928-12|AAL16320.2| 597|Caenorhabditis elegans Hypothetical
protein C44B7.2a protein.
Length = 597
Score = 101 bits (242), Expect = 6e-22
Identities = 53/172 (30%), Positives = 86/172 (50%)
Frame = -3
Query: 745 MGDGVSXERCVQXLNNVTVGDYTXTLAXSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNR 566
+G + + L + T S Q + + +P+ LPD SPSFKDY ++N R
Sbjct: 352 LGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPDGSPSFKDYSSSRNQR 411
Query: 565 FLTPASIHKNRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSS 386
F TP KNRI P+ LH+FN P + ++ LL + + P I FP ++ERS++
Sbjct: 412 FSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAA 471
Query: 385 GLMEFQNISQSVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQIGQGKGLKP 230
G EF+ + + + NH + P PF++K +++ R+ G G +P
Sbjct: 472 GTAEFETVEIANEVLALVNHTPVNSPYGSAPFIVKWAYATPRR-WDGSGGEP 522
>Z36948-5|CAD30435.1| 453|Caenorhabditis elegans Hypothetical
protein D2089.4b protein.
Length = 453
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -3
Query: 595 KDYVGNKNNRFLTPASIHKNRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISK 416
+DY + +RF P S + I PP LH N P VS+E+L ++F + G +
Sbjct: 350 RDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAG----FAVKA 405
Query: 415 FPLKSERSSSGLMEFQNISQSVMAIMAC-NHATIQHPGAKFPF 290
F + L + ++I ++ A++A NH ++ + F
Sbjct: 406 FKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSF 448
>Z36948-4|CAA85411.3| 615|Caenorhabditis elegans Hypothetical
protein D2089.4a protein.
Length = 615
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = -3
Query: 595 KDYVGNKNNRFLTPASIHKNRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISK 416
+DY + +RF P S + I PP LH N P VS+E+L ++F + G +
Sbjct: 512 RDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAG----FAVKA 567
Query: 415 FPLKSERSSSGLMEFQNISQSVMAIMAC-NHATIQHPGAKFPF 290
F + L + ++I ++ A++A NH ++ + F
Sbjct: 568 FKFFPKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSF 610
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 526 PPSKVLHFFNTPPDVSDEQLLQVFKDYG 443
P SKV+H N PPD+ D +L+Q+ YG
Sbjct: 118 PVSKVVHVRNIPPDLVDVELMQLCIQYG 145
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 490 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 329
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 490 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 329
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -3
Query: 490 PDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACN 329
PD+S+ L VF+ +G +++ P G +EF N++ AI N
Sbjct: 216 PDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGMN 269
>AJ131181-1|CAA10315.1| 962|Caenorhabditis elegans DAF-18 protein
protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 538 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 374
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF126286-1|AAD21620.1| 962|Caenorhabditis elegans PTEN
phosphatidylinositol 3' phosphatasehomolog DAF-18
protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 538 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 374
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF098286-1|AAD03420.1| 962|Caenorhabditis elegans DAF-18 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 538 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 374
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>AF036706-19|AAK39284.1| 962|Caenorhabditis elegans Abnormal dauer
formation protein 18 protein.
Length = 962
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = -3
Query: 538 NRIQPPSKVLHFFNTPPDVSDEQLLQVFKDYGVTPP-HTISKFPLKSERSSSGLME 374
N + P ++++ +++EQ ++ + +YG+ PP +TISK + E+ G+++
Sbjct: 407 NEFESPWQIVNPPGLEKHITEEQAMENYTNYGMIPPRYTISK--ILHEKHEKGIVK 460
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = -3
Query: 517 KVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIM 338
+ L + P D ++E L QVF + G P+ + + +K E +EF ++ +
Sbjct: 68 RTLWIGDVPTDWTEETLSQVFTECG-HAPYKVKRVYVKDELKGYCFIEFITFDEARQTLY 126
Query: 337 ACNHATIQHPGAKFPFVMKLCFSS 266
N I PG K LCF++
Sbjct: 127 DLNGNRI--PGFK-DIRFNLCFAN 147
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = -3
Query: 691 VGDYTXTLAXSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIHKNR 533
+ D T TL + + S+V LPD P+ + NRF T H+++
Sbjct: 75 LADETLTLDSADRFNASQVKQCIDLPDNHPAMASKTVLQTNRFSTVGDAHRSQ 127
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 691 VGDYTXTLAXSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIH-KNRIQPPSK 515
VGD T + + S+ +P K KD + K R L H K++ QPPSK
Sbjct: 513 VGDTTSDSEITSEGSYSDE-DPEQKEIKRQRRKDKLKKKQERELRSREKHTKSKQQPPSK 571
Query: 514 VLHFFNT 494
+ FNT
Sbjct: 572 IETRFNT 578
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -3
Query: 691 VGDYTXTLAXSKQAYLSEVMNPYPLPDKSPSFKDYVGNKNNRFLTPASIH-KNRIQPPSK 515
VGD T + + S+ +P K KD + K R L H K++ QPPSK
Sbjct: 517 VGDTTSDSEITSEGSYSDE-DPEQKEIKRQRRKDKLKKKQERELRSREKHTKSKQQPPSK 575
Query: 514 VLHFFNT 494
+ FNT
Sbjct: 576 IETRFNT 582
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,463,043
Number of Sequences: 27780
Number of extensions: 360987
Number of successful extensions: 974
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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