Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P14
         (798 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    24   1.4  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    22   5.7  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 63  PLPPPPETRSGQ 98
           PLPPPP  R G+
Sbjct: 374 PLPPPPPIRGGE 385


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 57   KSPLPPPPETRSGQCVCV 110
            + P PPPP   SGQ   V
Sbjct: 1353 QQPPPPPPPPSSGQAYLV 1370


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 638 SDEPVSASRQESFVQRLRG*QEQSLLNAGLYTQEQNTTTL 519
           SD   S  + +  +  +RG  +  L+NA  Y  E +T +L
Sbjct: 270 SDFVGSCRKTDQILYFIRGCLQTYLINASTYLNEVHTASL 309


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -2

Query: 638 SDEPVSASRQESFVQRLRG*QEQSLLNAGLYTQEQNTTTL 519
           SD   S  + +  +  +RG  +  L+NA  Y  E +T +L
Sbjct: 308 SDFVGSCRKTDQILYFIRGCLQTYLINASTYLNEVHTASL 347


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 6/26 (23%), Positives = 13/26 (50%)
 Frame = +3

Query: 237 RPLPCPICRDEEKHSFMTNGNFAPGC 314
           +P+P   C   E ++   + ++  GC
Sbjct: 157 KPIPASCCNSPENNTCSISNSYTNGC 182


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,005
Number of Sequences: 438
Number of extensions: 4789
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)