Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P13
         (768 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA...    30   4.0  
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA...    29   7.0  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   9.3  

>AE014134-884|AAF52222.1|  299|Drosophila melanogaster CG14035-PA
           protein.
          Length = 299

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -1

Query: 675 PGSSNPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAY-LTPSSLGMANG 502
           P   NPR H P +P  +S    P +P     AP   P +S   P  + ++P+ +    G
Sbjct: 13  PRGWNPRAHNPASPSPSSFLYRPPSPW--TTAPSPPPIISGPRPYGHAMSPAPINQVRG 69


>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
           protein.
          Length = 2284

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = -1

Query: 675 PGSSNPRFHTPTTPDLTSISI---NPLTPX*KEFAPGLKPPLSSEAPSAYLTPS 523
           PGS+ P    PT+P  T+I I   +  TP  + + PG   P  +E P     PS
Sbjct: 341 PGSNEPGCPRPTSPPPTTIRIPIASTFTPRPRCY-PGSNDPSCNETPQTTSLPS 393


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = -1

Query: 678 QPGSSNPRFHTPTTPDLTSISINPLTPX*KEFAPGLKPPLSSEAPSAYLTPSSLGMANGV 499
           Q  S+      PTTP  T  SI+P T   KE AP  +    +   +   TP   G   G 
Sbjct: 402 QYASTKAACPAPTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGP 460

Query: 498 SP 493
           SP
Sbjct: 461 SP 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,646,170
Number of Sequences: 53049
Number of extensions: 729576
Number of successful extensions: 2576
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2576
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)