BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_P04
(846 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 37 0.11
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 37 0.11
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 37 0.11
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 37 0.11
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 33 0.99
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 33 0.99
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 33 0.99
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 33 0.99
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 33 0.99
AK092437-1|BAC03890.1| 308|Homo sapiens protein ( Homo sapiens ... 32 3.0
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 31 5.3
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 31 5.3
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 31 5.3
AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens ... 30 9.2
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 689 RVHQPGSSNPRIPYTNHPQT*HPFP-SIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
R P + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 408 RSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 689 RVHQPGSSNPRIPYTNHPQT*HPFP-SIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
R P + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 408 RSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 466
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 689 RVHQPGSSNPRIPYTNHPQT*HPFP-SIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
R P + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 160 RSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 218
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 36.7 bits (81), Expect = 0.11
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 689 RVHQPGSSNPRIPYTNHPQT*HPFP-SIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
R P + P P+ +H + PFP S+P F P L+PP S P+ + P++L
Sbjct: 439 RSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAPPTAL 497
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 33.5 bits (73), Expect = 0.99
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 731 GFAXMHQATLPLXFRVHQPGSSNPRIPY------TNHPQT*HPFPSIPLTPY*KEFAPGL 570
G A LP+ V P S + P T P T P P P TP E +P
Sbjct: 168 GSAGPQSLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNT-KPCPPTPTTP---ETSPPP 223
Query: 569 KPPLSSEAP-SAYLTPSSL 516
PP S P SA+LTPSSL
Sbjct: 224 PPPPPSSTPCSAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 33.5 bits (73), Expect = 0.99
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 731 GFAXMHQATLPLXFRVHQPGSSNPRIPY------TNHPQT*HPFPSIPLTPY*KEFAPGL 570
G A LP+ V P S + P T P T P P P TP E +P
Sbjct: 11 GSAGPQSLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNT-KPCPPTPTTP---ETSPPP 66
Query: 569 KPPLSSEAP-SAYLTPSSL 516
PP S P SA+LTPSSL
Sbjct: 67 PPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 33.5 bits (73), Expect = 0.99
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 731 GFAXMHQATLPLXFRVHQPGSSNPRIPY------TNHPQT*HPFPSIPLTPY*KEFAPGL 570
G A LP+ V P S + P T P T P P P TP E +P
Sbjct: 307 GSAGPQSLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNT-KPCPPTPTTP---ETSPPP 362
Query: 569 KPPLSSEAP-SAYLTPSSL 516
PP S P SA+LTPSSL
Sbjct: 363 PPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 33.5 bits (73), Expect = 0.99
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 731 GFAXMHQATLPLXFRVHQPGSSNPRIPY------TNHPQT*HPFPSIPLTPY*KEFAPGL 570
G A LP+ V P S + P T P T P P P TP E +P
Sbjct: 307 GSAGPQSLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNT-KPCPPTPTTP---ETSPPP 362
Query: 569 KPPLSSEAP-SAYLTPSSL 516
PP S P SA+LTPSSL
Sbjct: 363 PPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 33.5 bits (73), Expect = 0.99
Identities = 30/79 (37%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = -2
Query: 731 GFAXMHQATLPLXFRVHQPGSSNPRIPY------TNHPQT*HPFPSIPLTPY*KEFAPGL 570
G A LP+ V P S + P T P T P P P TP E +P
Sbjct: 307 GSAGPQSLPLPILEPVKNPCSVKDQTPLQLSVEDTTSPNT-KPCPPTPTTP---ETSPPP 362
Query: 569 KPPLSSEAP-SAYLTPSSL 516
PP S P SA+LTPSSL
Sbjct: 363 PPPPPSSTPCSAHLTPSSL 381
>AK092437-1|BAC03890.1| 308|Homo sapiens protein ( Homo sapiens
cDNA FLJ35118 fis, clone PLACE6007436, highly similar to
Homo sapiens hairy and enhancer of split related-1
(HESR-1) ).
Length = 308
Score = 31.9 bits (69), Expect = 3.0
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -2
Query: 674 GSSNPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVS 495
GS++P P P + P P +P+ A L PPL S S P S G +S
Sbjct: 224 GSAHPEAPALRAPPSGSPGPVLPVVTS----ASKLSPPLLSSVASLSAFPFSFGSFHLLS 279
Query: 494 PPYFQVNDESQASRL 450
P + +QA+ L
Sbjct: 280 PNALSPSAPTQAANL 294
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -2
Query: 710 ATLPLXFRVHQPGSSNPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYL 531
A LP + QPG + P P + QT P P+ L P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPH-PGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFS 623
Query: 530 TPSSLGMAKGVSPPY 486
P + S PY
Sbjct: 624 APGVMNFG-NPSYPY 637
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -2
Query: 710 ATLPLXFRVHQPGSSNPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYL 531
A LP + QPG + P P + QT P P+ L P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPH-PGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFS 623
Query: 530 TPSSLGMAKGVSPPY 486
P + S PY
Sbjct: 624 APGVMNFG-NPSYPY 637
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -2
Query: 710 ATLPLXFRVHQPGSSNPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYL 531
A LP + QPG + P P + QT P P+ L P +PG PP AP+ +
Sbjct: 565 APLPPQGMLVQPGMNLPH-PGLHPHQTPAPLPNPGLYPPPVSMSPGQPPPQQLLAPTYFS 623
Query: 530 TPSSLGMAKGVSPPY 486
P + S PY
Sbjct: 624 APGVMNFG-NPSYPY 637
>AK054581-1|BAB70764.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ30019 fis, clone 3NB692000545. ).
Length = 262
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 623 PFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSL 516
PFP +P +P FAP L+PP +AP + P L
Sbjct: 90 PFPPVPGSP----FAPSLRPPAWMDAPRLPVRPGVL 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,959,188
Number of Sequences: 237096
Number of extensions: 2858312
Number of successful extensions: 7575
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7561
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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