Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P04
         (846 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    35   0.16 
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    35   0.16 
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    35   0.16 
AM412919-1|CAL85542.1|  181|Drosophila melanogaster CG16743 prot...    31   1.5  
AM412917-1|CAL85540.1|  181|Drosophila melanogaster CG16743 prot...    31   1.5  
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB...    29   6.1  
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA...    29   6.1  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -2

Query: 662  PRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 483
            P +P    P    P P+IP TP   + A  L PP S  A + Y TP     A    P   
Sbjct: 933  PTLPPVTLPPVTQPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVT 990

Query: 482  QVNDESQASRLIS 444
            + ++E + +  +S
Sbjct: 991  ESSEEVEGTNTVS 1003


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -2

Query: 662  PRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 483
            P +P    P    P P+IP TP   + A  L PP S  A + Y TP     A    P   
Sbjct: 922  PTLPPVTLPPVTQPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVT 979

Query: 482  QVNDESQASRLIS 444
            + ++E + +  +S
Sbjct: 980  ESSEEVEGTNTVS 992


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 34.7 bits (76), Expect = 0.16
 Identities = 22/73 (30%), Positives = 32/73 (43%)
 Frame = -2

Query: 662 PRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 483
           P +P    P    P P+IP TP   + A  L PP S  A + Y TP     A    P   
Sbjct: 726 PTLPPVTLPPVTQPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVT 783

Query: 482 QVNDESQASRLIS 444
           + ++E + +  +S
Sbjct: 784 ESSEEVEGTNTVS 796


>AM412919-1|CAL85542.1|  181|Drosophila melanogaster CG16743 protein
           protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = -2

Query: 665 NPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSP 492
           NP +PY  +PQ    +PS P  PY     P    P  +  PS Y  P   G   G  P
Sbjct: 73  NPYMPYPPYPQM-GGYPSYPYNPYMPPPPPPPPHPQQAPPPSMY-PPGPSGYPGGYPP 128


>AM412917-1|CAL85540.1|  181|Drosophila melanogaster CG16743 protein
           protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 20/58 (34%), Positives = 24/58 (41%)
 Frame = -2

Query: 665 NPRIPYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMAKGVSP 492
           NP +PY  +PQ    +PS P  PY     P    P  +  PS Y  P   G   G  P
Sbjct: 73  NPYMPYPPYPQM-GGYPSYPYNPYMPPPPPPPPHPQQAPPPSMY-PPGPSGYPGGYPP 128


>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
            isoform B protein.
          Length = 1535

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 536  TLMEPLMTTEALTPARTPSSTASGGLMEMDVKSGGG 643
            T+     TT  +TP+R PSST S      D  S GG
Sbjct: 1026 TMTTKTTTTTMMTPSRAPSSTISTISSASDTTSSGG 1061


>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
           isoform A protein.
          Length = 1395

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +2

Query: 536 TLMEPLMTTEALTPARTPSSTASGGLMEMDVKSGGG 643
           T+     TT  +TP+R PSST S      D  S GG
Sbjct: 886 TMTTKTTTTTMMTPSRAPSSTISTISSASDTTSSGG 921


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,589,893
Number of Sequences: 53049
Number of extensions: 860608
Number of successful extensions: 2458
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2450
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)