Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_P01
         (769 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    29   7.0  
AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p pro...    29   7.0  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    29   7.0  
AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB...    29   7.0  
AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA...    29   7.0  
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    29   9.3  

>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AY071688-1|AAL49310.1|  947|Drosophila melanogaster RH10407p
           protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 363 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 184
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 385 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 439

Query: 183 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 76
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 440 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 475


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -2

Query: 324 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 172
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AE013599-2836|AAM70845.1|  947|Drosophila melanogaster CG7097-PB,
           isoform B protein.
          Length = 947

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 363 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 184
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 385 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 439

Query: 183 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 76
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 440 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 475


>AE013599-2835|AAF57595.1| 1218|Drosophila melanogaster CG7097-PA,
           isoform A protein.
          Length = 1218

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 29/96 (30%), Positives = 43/96 (44%)
 Frame = -2

Query: 363 GQNGKQSTSPKTRHLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSP 184
           G NG  S++  +   G+S  TNG     KH     + P  ATK +    +  +SP + S 
Sbjct: 656 GGNGGGSSNISSSG-GASSGTNGLLD--KHE--LDALPQAATKSAGDGFSHSNSPTANSG 710

Query: 183 DLLSGSRFRSGGRFCEARLLLGFVLATSSGLSPVSS 76
              +GSR   G     +  L   +L +SSG +P  S
Sbjct: 711 AGATGSRDNDGPSSSNSSHLYQNLLRSSSGETPAGS 746


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
           protein.
          Length = 1161

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -2

Query: 690 YSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIARHERTGRL 556
           + H    + +HL + H H+ H    H  A   H     H++ G L
Sbjct: 712 HHHHHHHSGQHLGNHHHHSHHHGYNHNGAHNHHHHSHSHQKLGHL 756


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,442,061
Number of Sequences: 53049
Number of extensions: 720833
Number of successful extensions: 2405
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2405
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)