Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_O08
         (836 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL139410-3|CAI12718.1|  902|Homo sapiens RUN and SH3 domain cont...    33   0.97 
AL139410-2|CAI12719.1|  796|Homo sapiens RUN and SH3 domain cont...    33   0.97 

>AL139410-3|CAI12718.1|  902|Homo sapiens RUN and SH3 domain
           containing 1 protein.
          Length = 902

 Score = 33.5 bits (73), Expect = 0.97
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 PTPXVXXRDPXVGWALARLTXXSXRAPPPPL 320
           P P V  RDP VGWAL        R PPPP+
Sbjct: 381 PAPPVPPRDPPVGWALV-----PPRPPPPPV 406


>AL139410-2|CAI12719.1|  796|Homo sapiens RUN and SH3 domain
           containing 1 protein.
          Length = 796

 Score = 33.5 bits (73), Expect = 0.97
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -2

Query: 412 PTPXVXXRDPXVGWALARLTXXSXRAPPPPL 320
           P P V  RDP VGWAL        R PPPP+
Sbjct: 381 PAPPVPPRDPPVGWALV-----PPRPPPPPV 406


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,797,555
Number of Sequences: 237096
Number of extensions: 856399
Number of successful extensions: 1033
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)