Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_O07
(795 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1289.12 |usp109||U1 snRNP-associated protein Usp109|Schizosa... 30 0.44
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.77
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 1.0
SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein ... 28 1.3
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 28 1.8
SPBC32C12.02 |ste11|aff1, stex|transcription factor Ste11|Schizo... 27 2.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 2.3
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 2.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.1
SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein T... 27 3.1
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 27 3.1
SPAPB1E7.06c |eme1||Holliday junction resolvase subunit Eme1|Sch... 27 4.1
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 5.4
SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyce... 26 5.4
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 26 7.1
SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual 26 7.1
SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 7.1
SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomy... 25 9.4
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 25 9.4
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 25 9.4
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 9.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 25 9.4
>SPBC1289.12 |usp109||U1 snRNP-associated protein
Usp109|Schizosaccharomyces pombe|chr 2|||Manual
Length = 352
Score = 29.9 bits (64), Expect = 0.44
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = -1
Query: 714 KPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLT 535
+PPS A+ + + P P P + + NP TP+ P + A + L
Sbjct: 245 RPPSMALLPSKQSTYWPALAAPVYPSMKDVPNNPFTPF-SPINPYYAKSWNHTASAPLLP 303
Query: 534 PSSLGMXKGVSPPYFQV 484
P G+ G PY V
Sbjct: 304 P---GLKNGSDYPYLSV 317
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.77
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -1
Query: 708 PSPAISGTSTRSSN---PXFHTPTTPDLTSIS-INPLTPY*KEFAPGLKP 571
P P+IS T+T SS H PTTPD ++ + L P +P KP
Sbjct: 273 PKPSISTTTTGSSYRSAESSHAPTTPDHFKLTPLTKLEPQPPSGSPSKKP 322
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 711 PPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAP 550
PP PA + ++ SS+P T +T TS SI P P + PP SS P
Sbjct: 370 PPPPASTSSTGTSSSPLLST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSSSTP 421
Score = 27.9 bits (59), Expect = 1.8
Identities = 25/86 (29%), Positives = 35/86 (40%)
Frame = -1
Query: 711 PPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTP 532
PP PA + ++ SS+P T +T TS SI P P + PP S+ + S P
Sbjct: 316 PPPPASTSSTGTSSSPLPST-STSCTTSTSIPPTGNSTTPVTPTV-PPTSTSSTSTPPPP 373
Query: 531 SSLGMXKGVSPPYFQVNDESQASRLI 454
+S S P + S I
Sbjct: 374 ASTSSTGTSSSPLLSTSTSCTTSTSI 399
>SPAC22A12.08c |||cardiolipin synthase/ hydrolase fusion protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 570
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 105 RNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVVQYG 233
R +A Y+ + LGG++ S+ EK F + N DV+ + G
Sbjct: 112 RALADKYKHVLVLGGKDNSVRETAEKYGFKSVINELDVIAKLG 154
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 27.9 bits (59), Expect = 1.8
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = -1
Query: 699 AISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLG 520
A+ T T S+NP T I N + K F+ PP++++ P +L P+S
Sbjct: 683 ALPATVTTSANPLGFKSTIQRPIPIKNNEDSDSCKAFSQA--PPIATKKPPTFLKPNSPE 740
Query: 519 MXKGVSP 499
K V P
Sbjct: 741 YAKTVIP 747
>SPBC32C12.02 |ste11|aff1, stex|transcription factor
Ste11|Schizosaccharomyces pombe|chr 2|||Manual
Length = 468
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = -1
Query: 705 SPAISGTSTRSS-NPXFHTPTTPDLTSISINPLTP-----Y*KEFAPGLKPPLSSEAPSA 544
SP +S S +P P+TP + SI+P TP Y + A L PLS + +A
Sbjct: 284 SPELSADKVLSHCSPIDARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTA 343
Query: 543 YL 538
YL
Sbjct: 344 YL 345
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = -1
Query: 738 LAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSIS 622
LA S S IS +ST N FH PT TS S
Sbjct: 790 LATSLYLSSSSSRTISTSSTNEYNTSFHAPTVSSTTSSS 828
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 27.5 bits (58), Expect = 2.3
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = -1
Query: 777 SQLXATP*SFXIILAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY* 598
S L +T S+ + + L +PPSP I R+S F +PT S+ +
Sbjct: 474 SPLQSTLPSYEDVARIEHLS-RPPSPGIVTPPQRTSPSFFVSPTESTRQSLDSRRSFEHS 532
Query: 597 KEFAPGLKPPLSSEAPSAYLTPSS 526
+ G+ P SS A A+L+ +S
Sbjct: 533 TSSSSGISPSHSS-ASLAHLSQAS 555
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 260 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASI 165
CY P + + L ++I+T+L DN ++ A++
Sbjct: 168 CYSLDPSYKSQLEEHIKTLLSDNSPIVVPAAL 199
>SPBC29A3.14c |trt1||telomerase reverse transcriptase 1 protein Trt1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 988
Score = 27.1 bits (57), Expect = 3.1
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = -2
Query: 359 KVKIADNNLVTHKELALKVSSIIGTRVYVFDPSCYFSTPPFDTVLYDNIRTVLKDNKTAL 180
K K+ D V K + +S T+ +V + YF PF+ V+ +K + T
Sbjct: 608 KKKLKDPEFVIRKYATIHATSDRATKNFVSEAFSYFDMVPFEKVVQ---LLSMKTSDTLF 664
Query: 179 LSASIQASLPSSEIYRQL 126
+ + SSEI++ L
Sbjct: 665 VDFVDYWTKSSSEIFKML 682
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 27.1 bits (57), Expect = 3.1
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -3
Query: 730 FALMHQATXPCDFGYINPIIKSXIPYTNHP 641
F + HQA C +GY + + +P+ N P
Sbjct: 346 FIICHQAILRCIYGYYHNLSLEELPFINVP 375
>SPAPB1E7.06c |eme1||Holliday junction resolvase subunit
Eme1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.6 bits (56), Expect = 4.1
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = -1
Query: 708 PSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTP-Y*KEFAPGLKPPLSSEAPSAYLTP 532
P ++S FHTPT P T +S +P + + PLS +A S LT
Sbjct: 123 PPNSLSSQPKHQEFHLFHTPTIPRTTQLSSKTSSPIVIPDDNEQVASPLSKKAAS--LTS 180
Query: 531 SSLGMXKGVSPPYFQVNDESQA 466
S L + SPP V +S +
Sbjct: 181 SPLKDFQS-SPPLSTVLQKSHS 201
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 753 SFXIILAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDL 634
SF L S +KP P+I+ + SN H P+TP+L
Sbjct: 227 SFNDALTSSSSILKPCMPSIASPT---SNRLSHAPSTPNL 263
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 470 KLRALLVVIPRILRSPPPTHPLIEDV 393
KLR++L I ++LR P P PL+ +
Sbjct: 105 KLRSVLEQILQLLREPNPDDPLVASI 130
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.2 bits (55), Expect = 5.4
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 2/96 (2%)
Frame = -1
Query: 735 AVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSE 556
A SP PP A + TS SS P ++ NP AP +P
Sbjct: 398 AASPQAGHPPPWAAASTSVSSSTSSPAPWAKPASSAAPSNP--------APWQQPAAPQS 449
Query: 555 APSAYLTPSSLGMXKGVSPPYFQVNDES--QASRLI 454
AP+ + PSSL PP+ Q +S Q S L+
Sbjct: 450 APALSMNPSSL-------PPWQQPTQQSAVQPSNLV 478
>SPBC8D2.02c |||vacuolar sorting protein Vps68|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 170
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 158 SLPSSEIYRQLVDSRHVSSDSFGVY 84
+L S I+R + S HVSS S GVY
Sbjct: 2 TLLDSSIFRFRLSSLHVSSRSLGVY 26
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 25.8 bits (54), Expect = 7.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 94 KESEETWRESTNWR*ISEEG 153
KE E W + NW+ SEEG
Sbjct: 809 KEELEAWTRAFNWQKASEEG 828
>SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 25.8 bits (54), Expect = 7.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 137 YRQLVDSRHVSSDSFGVYVKS*SLILHSFGLLV 39
YRQLVD R ++ D F + K+ LH + V
Sbjct: 34 YRQLVDGRELTLDDFISHAKALRTHLHRLDINV 66
>SPBP19A11.02c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 25.8 bits (54), Expect = 7.1
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -1
Query: 744 IILAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPL 565
+ V+P + + + S+ S+ H+ T+ ++TSI P T + PP
Sbjct: 30 VATTVTPTPLPSANVTTTSFSSASTETSTHSVTSTNITSIVPPPSTSH--NSTTTTVPPT 87
Query: 564 SSEAPSAYLTP-SSLGMXKGVSPPYFQVN 481
+S + + P +SL +PP VN
Sbjct: 88 TSMNTTTTVPPTTSLNTTTTTAPPTTHVN 116
>SPAC57A7.07c |||homocysteine methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -2
Query: 335 LVTHKELALKVSSIIGTRVYVFDPSCY 255
+V H E LKV II T Y D S Y
Sbjct: 37 VVKHHEEFLKVCDIISTFTYQLDASIY 63
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 9.4
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -1
Query: 699 AISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSS 526
A+ ++ S F PTT S+SI+P K A +P + ++ S TP++
Sbjct: 69 AVETNASASHETSFALPTTSPAASLSISPT----KSAAVSSEPNVEADVKSLSSTPAA 122
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 475 ITSFAPY*SSFHAYSAPLLQLTPSSKTSS 389
+ SF PY S F A P L ++PS+ +S
Sbjct: 302 LQSFHPYESLFSAGQPPSLPISPSTSQNS 330
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 25.4 bits (53), Expect = 9.4
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 120 IYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVV 221
++Q A+ LG RS RC KSSF+ + DVV
Sbjct: 33 LHQQAL-LGRNGRSSKRCSPKSSFIRNSPKIDVV 65
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 25.4 bits (53), Expect = 9.4
Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = -1
Query: 705 SPAISGTSTRSSNPXFHTP----TTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYL 538
+P S T+ +S P + +TP +S +N TP A PP++S
Sbjct: 1606 TPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSTALNTSPPITSSTVVNSS 1665
Query: 537 TPSSLGMXKGVSPP 496
TP + S P
Sbjct: 1666 TPITSSTVVNTSTP 1679
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,049,463
Number of Sequences: 5004
Number of extensions: 62038
Number of successful extensions: 265
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 387388442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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