Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_O07
(795 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 34 0.15
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 33 0.20
12_01_0298 - 2250517-2251235,2251331-2251577,2251615-2252951,225... 29 3.2
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 3.2
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 29 4.3
01_06_1293 - 36050847-36051304,36052343-36052826 29 4.3
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 29 5.6
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 5.6
09_04_0564 + 18565583-18566449,18569662-18570123 29 5.6
02_01_0302 - 2021221-2023305 29 5.6
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 29 5.6
11_06_0610 - 25449085-25453284 28 7.4
06_01_1069 + 8731567-8731632,8732120-8732281,8733028-8733081,873... 28 7.4
01_01_0070 - 542603-542686,542803-543441 28 7.4
05_01_0493 + 4113869-4116728,4116859-4117370 28 9.8
03_02_0371 + 7858170-7859624 28 9.8
02_02_0718 - 13290764-13290897,13292375-13293041,13293364-132937... 28 9.8
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = -1
Query: 711 PPSPAISGTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 541
P SP+ S TS + S ++PT+P TS +P +P +P P PS
Sbjct: 1761 PTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHA 1820
Query: 540 LTPSSLGMXKGVSPPY 493
+PSS SP Y
Sbjct: 1821 YSPSSPNYYSSTSPTY 1836
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 33.5 bits (73), Expect = 0.20
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = -1
Query: 711 PPSPAISGTS-TRSSNPXFHTPTTPDL--TSISINPLTPY*KEFAPGLKPPLSSEAPSAY 541
P SP+ S TS + S ++PT+P TS S +P +P +P P + +PS
Sbjct: 1699 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPSHA 1758
Query: 540 LTPSS--LGMXKGVSPPY 493
+PSS L SP Y
Sbjct: 1759 YSPSSPRLSPYSQTSPNY 1776
>12_01_0298 -
2250517-2251235,2251331-2251577,2251615-2252951,
2256029-2256188
Length = 820
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 729 SPLCIKPPSPAISGTSTRSSNPXFHTPTTPD 637
SP + P +PA S +S SS+P TP + D
Sbjct: 326 SPQSVVPSNPAASSSSVASSSPALATPESRD 356
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -1
Query: 711 PPSPAISGTSTRSSNPXFHTPT---TPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAY 541
PPSP+I + T +TPT TP S +P TP + P + +PS+
Sbjct: 105 PPSPSIGTSPTTPGGGGGYTPTPSDTPPSPSSDTSPSTPG-GGCSSSPTPCDAPPSPSSD 163
Query: 540 LTPSSLGMXKGVSP 499
+P++ G G SP
Sbjct: 164 TSPTTPGGGGGYSP 177
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Frame = -1
Query: 717 IKPPSPAISGTSTR-SSNP--XFHTPTTPDLTSISINPLTP 604
I PPSPA + S+R S +P F TP T T+ S +P +P
Sbjct: 25 ITPPSPASTPRSSRPSESPRSGFSTPATAPRTAASPSPPSP 65
>01_06_1293 - 36050847-36051304,36052343-36052826
Length = 313
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -1
Query: 738 LAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKP 571
LA++P + PP P + T+T + N TP ++ N + Y ++ P L P
Sbjct: 135 LAMAPTAMPPPPPPPATTTTAACNAGGVMFRTPSFMPVATNNASYYPQQQTPLLYP 190
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 28.7 bits (61), Expect = 5.6
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = -1
Query: 744 IILAVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPL 565
I L+ SP + P S ++RSS P P TP S P TP A L PP
Sbjct: 154 IRLSPSPRSMSRTRP--SSAASRSSPPFALQPPTP-----SWRPSTP---PSAKTLTPPR 203
Query: 564 SSEAPSAYLTP 532
S +P++ LTP
Sbjct: 204 RSPSPASTLTP 214
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 78 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 224
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 28.7 bits (61), Expect = 5.6
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = -1
Query: 708 PSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPS 529
PSP+ +G + SS P F PT ++ + P T AP PPL P LTP+
Sbjct: 25 PSPSPAGAYSSSSFPFF--PTAGVTSTTAATPPT----TTAPP-SPPLREALPLLSLTPA 77
Query: 528 SLG 520
S G
Sbjct: 78 SRG 80
>02_01_0302 - 2021221-2023305
Length = 694
Score = 28.7 bits (61), Expect = 5.6
Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = -1
Query: 708 PSPAISGTSTRSSNPXFHTPTTPDLTS--ISINPLTPY*KE-----FA--PGLKPPLSSE 556
PSP S T+ S +P TPT P S ++ P P + FA PG P+ S
Sbjct: 519 PSPPSSSTAPPSHSPPQSTPTHPSYPSPPVTYTPPPPTSADRPDVRFAPPPGSYGPIPST 578
Query: 555 APSAYLTPSSLGMXKGVSPP 496
PS+ PS G PP
Sbjct: 579 PPSSGSPPSP---SSGYQPP 595
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1
Query: 699 AISGTSTRSSNPXFHTPTTP 640
A S T+TR S P H PTTP
Sbjct: 2 AASSTATRLSPPRLHAPTTP 21
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = -1
Query: 711 PPSPAISGTSTRSSNPXFHTPTTPDLTSIS-INPLTPY*KEFAPGLKPPLSSE 556
PP+P +S P HTP+ P+ T S +P TP K +P PP + E
Sbjct: 618 PPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSP---PPPTPE 667
>06_01_1069 +
8731567-8731632,8732120-8732281,8733028-8733081,
8733557-8733630,8733706-8733786,8734902-8735079,
8735336-8735506,8736113-8736202,8736284-8736331,
8736447-8736562,8736655-8736733,8737101-8737223
Length = 413
Score = 28.3 bits (60), Expect = 7.4
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Frame = -1
Query: 693 SGTSTRSSNPXFHT-PTTPDLTSISINP------LTPY*KEFAPGLKPPLSSEAPSAYLT 535
SG ST S P + P TP + S++ P +TP + P +PP++S P+A T
Sbjct: 82 SGASTASKAPVSQSQPATP-VASVARTPPPQAPVVTP--EPAPPSAQPPVASATPAAAAT 138
Query: 534 PSS 526
P++
Sbjct: 139 PAA 141
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -1
Query: 735 AVSPLCIKPPSPAISGTSTRSSNPXFHTPTTPDLTSISINPLTPY*KEFAPGLKPPLS-- 562
AV+P+ PP+P + + P P TP +S P TP P PP++
Sbjct: 76 AVAPVTPPPPTPKKAPPPPVTPPPVTPPPVTP--PPVSPPPATPP-PALPPSTPPPVAAP 132
Query: 561 SEAPSAYLTPSS 526
+EAP+A L P++
Sbjct: 133 AEAPAA-LPPAT 143
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -2
Query: 248 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVS 105
+PP+D LY + + D +L A++ S E+YR + S V+
Sbjct: 753 SPPWDVTLYQKLEIGVSDVARSLTPANVIGHGWSGEVYRASMPSSGVT 800
>03_02_0371 + 7858170-7859624
Length = 484
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 781 KESIXGHPLIFXHNIGGFALMHQATXPCDFGYINPIIKSXI 659
++ + G P+ + GG HQ T DF YI+ I+K +
Sbjct: 316 RDILAGRPITVYESAGGGT--HQTTISRDFTYIDDIVKGCV 354
>02_02_0718 -
13290764-13290897,13292375-13293041,13293364-13293719,
13294559-13294629,13295326-13295336
Length = 412
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 446 IPRILRSPPPTHPLIEDVVMATNQAIIDYK 357
+P++L+SPP T+ IED + + ID K
Sbjct: 382 LPQLLQSPPETYHAIEDGHNPSKTSFIDMK 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,200,591
Number of Sequences: 37544
Number of extensions: 461874
Number of successful extensions: 1463
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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