Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_N14
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical pr... 30 2.1
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 30 2.1
D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein. 30 2.1
AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical ... 30 2.1
U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical pr... 24 6.2
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 28 6.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 6.5
Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 28 8.6
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 28 8.6
>U80845-2|AAK39179.2| 582|Caenorhabditis elegans Hypothetical
protein C24A8.1 protein.
Length = 582
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 417 TSLTRRYSHTEEANREHLSSTHKHALHRKNLHPPAEPEHRRIAR 548
TS RR+SH + NRE ++S LH +L PP E R++ R
Sbjct: 334 TSRKRRHSHQPQGNREVVTSEESKKLH--SLKPPL-VEKRKMRR 374
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/74 (27%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Frame = +1
Query: 388 TTQTTILRVPPLLHDVTPTLRK--PTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 561
TT T P TPT PT T T+T T P T +P T
Sbjct: 193 TTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
Query: 562 DVLSYXVTTTSDVS 603
+ + TTT+ +
Sbjct: 253 ETTTTTPTTTTQTT 266
Score = 28.7 bits (61), Expect = 4.9
Identities = 22/78 (28%), Positives = 26/78 (33%)
Frame = +1
Query: 382 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 561
P TT TT T T PT T T+T T T P T + T P
Sbjct: 88 PTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTT----TTPTTTTTETTTTP 143
Query: 562 DVLSYXVTTTSDVSIFLP 615
+ TTT + P
Sbjct: 144 TTTTTETTTTPTTTTTTP 161
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/69 (30%), Positives = 25/69 (36%)
Frame = +1
Query: 388 TTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDV 567
TT T P TPT PT T T+T T T P T + T P
Sbjct: 103 TTTTETTTTPTTETTTTPTTTTPTTTTTTPTTTTTETTTT------PTTTTTETTTTPTT 156
Query: 568 LSYXVTTTS 594
+ TTT+
Sbjct: 157 TTTTPTTTT 165
Score = 28.7 bits (61), Expect = 4.9
Identities = 23/76 (30%), Positives = 28/76 (36%), Gaps = 4/76 (5%)
Frame = +1
Query: 379 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTS--THFTGKTCIRQ--RNPNTAASP 546
+P TT TT T T PT T A T+ T T T Q P T +
Sbjct: 216 VPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTT 275
Query: 547 DTNAPDVLSYXVTTTS 594
T P + TTT+
Sbjct: 276 PTTTPTTTTTPTTTTT 291
>Z69792-1|CAB61002.1| 605|Caenorhabditis elegans Hypothetical
protein F40E10.1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 382 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 543
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +1
Query: 379 LPATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNA 558
LP TT+ T+ P + + +KPT T T K P T P T
Sbjct: 591 LPFTTEQTVTTEEPTTAEKSTATQKPTTTQESVSTEKTSTTKKASTTEEPTTTDEPTTTT 650
Query: 559 PDVLSYXVTT 588
+ TT
Sbjct: 651 ESSTTGKATT 660
>D85744-1|BAA12861.1| 605|Caenorhabditis elegans HCH-1 protein.
Length = 605
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/54 (37%), Positives = 22/54 (40%)
Frame = +1
Query: 382 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAAS 543
P TT TT P + V+PT T ARTST T Q P T S
Sbjct: 478 PTTTSTTTTTAPITVPTVSPTTTTTRQTTTTARTST----TTTTTQAPPTTTTS 527
>AC006720-9|AAF60443.2| 480|Caenorhabditis elegans Hypothetical
protein Y17G9B.1 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 130 VLWQVQPETSTCVPELQCVTDKWFWLPLYVPFKV 29
+LWQ+ +TC P LQ ++W L L + FK+
Sbjct: 421 ILWQL---ITTCKPRLQVDKERWIQLLLNIKFKI 451
>U39999-6|AAA81107.2| 198|Caenorhabditis elegans Hypothetical
protein F41G3.10 protein.
Length = 198
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = +1
Query: 457 TANTCQARTSTHFTGKTCIRQRNPNTAASPDT 552
T C +T T TC+ NP T S T
Sbjct: 83 TCGYCTGTATTTRTSTTCVDLTNPTTGVSDCT 114
Score = 22.6 bits (46), Expect(2) = 6.2
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 307 SHVRLPVQTHKTFYHHANFLPQQILPATTQTTI 405
S + + V +TF L QQ+L TT+T++
Sbjct: 10 SLLEVVVALMETFSQSPQHLQQQLLSTTTRTSV 42
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 412 VPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYXVTTT 591
VPP + T +KP+ T T+ T T P T+ S T+ + T T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 592 S 594
+
Sbjct: 643 T 643
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 412 VPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYXVTTT 591
VPP + T +KP+ T T+ T T P T+ S T+ + T T
Sbjct: 583 VPPTTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTAT 642
Query: 592 S 594
+
Sbjct: 643 T 643
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/70 (30%), Positives = 26/70 (37%)
Frame = +1
Query: 382 PATTQTTILRVPPLLHDVTPTLRKPTANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAP 561
P TT T+ P T T T T TST T T T + T +
Sbjct: 266 PETTTTSTTTTEPTTTTSTTT---QTTTTVPTSTSTISTTSTTTTTPTTTTTTTSTTTSD 322
Query: 562 DVLSYXVTTT 591
D+L +TTT
Sbjct: 323 DLLWVKITTT 332
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/33 (48%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 115 GPATAQCPTRRRTL-AQVQPERGAPISAVRAGG 210
GP A CP RTL A PE G +A AGG
Sbjct: 292 GPDAAYCPCPPRTLGAGAYPEGGDAAAAAPAGG 324
>Z93384-1|CAB07633.3| 342|Caenorhabditis elegans Hypothetical
protein H08M01.1 protein.
Length = 342
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 460 ANTCQARTSTHFTGKTCIRQRNPNTAASPDTNAPDVLSYXVTTTSDVSIFLPH 618
A+ Q RTS + + + R A+P T P + +TSD + +PH
Sbjct: 210 ASHTQYRTSPYVSARQGHRLAIARGRAAPGTLDPSASRQSIPSTSDAPVLVPH 262
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 333 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 506
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 507 LHPPAEPE 530
P +P+
Sbjct: 73 RSPSPQPQ 80
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 333 SQDILPPCKLLTATNLTSHHANYNFTG--STSLTRRYSHTEEANREHLSSTHKHALHRKN 506
S ++ + T T +S NYN ++S + + ++++H S K + +KN
Sbjct: 13 STELKKSTRATTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKN 72
Query: 507 LHPPAEPE 530
P +P+
Sbjct: 73 RSPSPQPQ 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,750,818
Number of Sequences: 27780
Number of extensions: 347162
Number of successful extensions: 1208
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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