Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_N13
         (779 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315...    30   2.4  
11_06_0529 + 24687027-24687064,24687150-24687610,24687709-246881...    29   3.1  
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526...    29   5.5  
06_01_0454 - 3234331-3236299,3237254-3238074                           28   7.2  
01_06_0695 - 31292622-31293317                                         28   7.2  

>02_04_0232 +
           21130122-21130454,21130895-21131053,21131424-21131582,
           21132420-21132512,21133321-21133437,21133623-21133697,
           21133878-21134104,21134200-21135073
          Length = 678

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 82  PSTTPRQERKSSTDYSEPRHRTELYPDLRSRD 177
           PS TP  ER  S+D   PR     Y   R+RD
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRD 396


>11_06_0529 +
           24687027-24687064,24687150-24687610,24687709-24688124,
           24688688-24688860,24689733-24689868,24689914-24690264,
           24691170-24691344,24691761-24691822
          Length = 603

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -3

Query: 336 ARICSLWSPESREALNNVTLLVAFRIQKRETRRRSPFGSRRS 211
           A+IC   SPE R  ++ VT +    +Q+ E  RRS  GSRR+
Sbjct: 509 AKICIQNSPELRPKMSEVTQI----LQENEEDRRSVEGSRRT 546


>08_01_0600 -
           5262573-5262773,5262850-5262952,5263050-5263180,
           5263263-5263312,5265266-5265725,5266349-5266708
          Length = 434

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 631 GENQKXPPRXWGXXPPPPK 575
           G+    PP+ WG  PPPP+
Sbjct: 45  GQAPPPPPQMWGQAPPPPQ 63


>06_01_0454 - 3234331-3236299,3237254-3238074
          Length = 929

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -3

Query: 411 RCSEATIRGIMPERL*GRSQXSRIPARICSLWS 313
           R +  T+ G++P      S  +++ AR+C+LW+
Sbjct: 132 RRNRYTLHGLVPTSSDASSSTTKVDARLCALWT 164


>01_06_0695 - 31292622-31293317
          Length = 231

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +1

Query: 34  PGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 168
           P     L   Q D   PS++      SST  S P HR  L P  R
Sbjct: 3   PSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,489,318
Number of Sequences: 37544
Number of extensions: 355797
Number of successful extensions: 892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)