Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_N12
         (828 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    30   3.4  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    30   3.4  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    30   3.4  
AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB...    29   5.9  
AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA...    29   5.9  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -3

Query: 652  PYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVN 473
            P T  P T  P P+IP TP   + A  L PP S  A + Y TP          P   + +
Sbjct: 937  PVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESS 993

Query: 472  DESQASRLIS 443
            +E + +  +S
Sbjct: 994  EEVEGTNTVS 1003


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -3

Query: 652  PYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVN 473
            P T  P T  P P+IP TP   + A  L PP S  A + Y TP          P   + +
Sbjct: 926  PVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESS 982

Query: 472  DESQASRLIS 443
            +E + +  +S
Sbjct: 983  EEVEGTNTVS 992


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 22/70 (31%), Positives = 31/70 (44%)
 Frame = -3

Query: 652 PYTNHPQT*HPFPSIPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSPPYFQVN 473
           P T  P T  P P+IP TP   + A  L PP S  A + Y TP          P   + +
Sbjct: 730 PVTLPPVT-QPPPTIPPTPPSTQSAQTLPPPTS--AINVYTTPDGPPTASQTKPSVTESS 786

Query: 472 DESQASRLIS 443
           +E + +  +S
Sbjct: 787 EEVEGTNTVS 796


>AE014298-394|AAS65251.1| 1535|Drosophila melanogaster CG14047-PB,
            isoform B protein.
          Length = 1535

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 535  TLMEPLMTTEALTPARTPSSTASGGLMEMDVXSGGG 642
            T+     TT  +TP+R PSST S      D  S GG
Sbjct: 1026 TMTTKTTTTTMMTPSRAPSSTISTISSASDTTSSGG 1061


>AE014298-393|AAF45777.2| 1395|Drosophila melanogaster CG14047-PA,
           isoform A protein.
          Length = 1395

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 535 TLMEPLMTTEALTPARTPSSTASGGLMEMDVXSGGG 642
           T+     TT  +TP+R PSST S      D  S GG
Sbjct: 886 TMTTKTTTTTMMTPSRAPSSTISTISSASDTTSSGG 921


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,013,049
Number of Sequences: 53049
Number of extensions: 809418
Number of successful extensions: 2289
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2279
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3921660132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)