Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_N08
(771 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 29 0.74
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 28 1.3
SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|... 27 3.9
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 26 5.2
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 6.9
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.9
SPAC664.07c |rad9||checkpoint clamp complex protein Rad9|Schizos... 26 6.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 6.9
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 25 9.1
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 29.1 bits (62), Expect = 0.74
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -2
Query: 482 PQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKS 306
P +KK TLDD D P+ S D S + ++E + N+ +S P S
Sbjct: 94 PSKKKATLDDWDIPTSSTETDTISTTHTSYIPTLLAKQEENEETKETTTNKNESLPGTS 152
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 491 SIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQT---QS 321
SI + L+ S++ + P+ A + P ++ E A+ N T +
Sbjct: 552 SISSRLPSSNLEQGSSSSVTKSPESMPDPSAKASSPVTSKGVSINEKSAVNNYATPLSKP 611
Query: 320 QPK--KSQRSTEAFPALSATAHSPAAPP 243
QPK K + F A S A PA+PP
Sbjct: 612 QPKDTKGSKLGNTFVAPSPAASLPASPP 639
>SPAC7D4.12c |||DUF1212 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 759
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 338 NNQTQSQPKKSQRSTEAFPALSATAHS 258
+NQT P +STE P S T HS
Sbjct: 269 SNQTFMAPASGLQSTEEIPQFSKTGHS 295
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 26.2 bits (55), Expect = 5.2
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = -2
Query: 521 RLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQAL 342
R +T+ +R + PPQ + +D+D S DD P I + ++ + M+ +
Sbjct: 110 RRRKTNNDRRNYPPQNRTAKPNDNDGDDYSFFEDDLPVIKDTFMR--GFQSFKQRSMEWV 167
Query: 341 KNNQTQSQPKKSQRSTEAFPALSATAHSP 255
+N ++ ++ E + A S SP
Sbjct: 168 ENIASKFDGEEEDDDDEKYSAPSKIYPSP 196
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = -2
Query: 488 IPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKK 309
+P Q K + + PSL + P G+ + NS + ++N+QTQS +
Sbjct: 367 VPSQFYKQKVVQNSPPSLLSTDNKIPESGSDHPS----SQDNSSKASLVENSQTQSSTPR 422
Query: 308 SQRSTEAFPALSATAHS 258
T P ++ HS
Sbjct: 423 KPLPTTTSPKVNPEPHS 439
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -2
Query: 308 SQRSTEAFPALSATAHSPAAPPQWITVS 225
S R E P+LSA A P PP TVS
Sbjct: 238 SSRPPERVPSLSAPAPPPIPPPSNGTVS 265
>SPAC664.07c |rad9||checkpoint clamp complex protein
Rad9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 25.8 bits (54), Expect = 6.9
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -2
Query: 365 NSQEMQALKNNQTQ--SQPKKSQRSTEAFPALSATAHSPAAPPQWIT 231
+ QE+ ++ N+ Q S P S E +L+A AH+P W T
Sbjct: 304 DEQEVSSMMGNRWQHSSTPASLFNSVERNNSLTAVAHNPPGSIGWQT 350
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = -2
Query: 518 LTQTSGNRISIPPQQKKPTLDDDDFPS-LSMGRDDHPNIGASSVQPPKVTMINSQEMQAL 342
L N S+ + +K ++DD S LS+ ++ N+ S Q K + +++ +
Sbjct: 1020 LKNNGENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYI 1079
Query: 341 KNNQTQSQPKKSQRSTE 291
+ N + +K QR+ E
Sbjct: 1080 EKNVQKLLDEKDQRNVE 1096
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = -2
Query: 443 PSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRSTEAFPALSATA 264
PS++M + PN P I+S Q + S+ K+ + T+A AL
Sbjct: 343 PSMNMFAQNGPNTSLLPTAMPSDVSISSSLQQQPIHPSYDSRFSKAPQGTDALAALGYGT 402
Query: 263 HSPAA 249
S AA
Sbjct: 403 PSSAA 407
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,332,906
Number of Sequences: 5004
Number of extensions: 41205
Number of successful extensions: 129
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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