Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_N08
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 33 0.86
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 33 0.86
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 33 0.86
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 33 1.1
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 33 1.1
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 33 1.1
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 33 1.1
U80737-1|AAB91436.1| 326|Homo sapiens CAGH16 protein. 32 2.0
AF171929-1|AAF03777.1| 820|Homo sapiens metallaproteinase-disin... 31 3.5
BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein pr... 31 4.6
AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange pro... 31 4.6
AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein pr... 31 4.6
DQ223931-1|ABB04281.1| 230|Homo sapiens protein phosphatase 1 r... 31 6.0
DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein. 31 6.0
AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein. 31 6.0
AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein pr... 31 6.0
AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin remod... 31 6.0
BX537879-1|CAD97878.1| 1044|Homo sapiens hypothetical protein pr... 30 8.0
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II protein.
Length = 1031
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -2
Query: 548 SQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTM 369
+ P + + +Q GN S P +K +DD +D ++ + S +
Sbjct: 835 ASPEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDK 891
Query: 368 INSQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
+ S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 892 VPSKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 947
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -2
Query: 548 SQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTM 369
+ P + + +Q GN S P +K +DD +D ++ + S +
Sbjct: 521 ASPEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDK 577
Query: 368 INSQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
+ S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 578 VPSKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 633
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Frame = -2
Query: 548 SQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTM 369
+ P + + +Q GN S P +K +DD +D ++ + S +
Sbjct: 1402 ASPEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDK 1458
Query: 368 INSQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
+ S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 1459 VPSKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 1514
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -2
Query: 542 PASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN 363
P + + +Q GN S P +K +DD +D ++ + S + +
Sbjct: 1427 PEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVP 1483
Query: 362 SQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 1484 SKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 1537
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -2
Query: 542 PASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN 363
P + + +Q GN S P +K +DD +D ++ + S + +
Sbjct: 156 PEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVP 212
Query: 362 SQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 213 SKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 266
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -2
Query: 542 PASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN 363
P + + +Q GN S P +K +DD +D ++ + S + +
Sbjct: 291 PEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVP 347
Query: 362 SQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 348 SKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 401
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 33.1 bits (72), Expect = 1.1
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Frame = -2
Query: 542 PASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMIN 363
P + + +Q GN S P +K +DD +D ++ + S + +
Sbjct: 815 PEKSLHDKKSQDFGNLFSFPSYSQK---SEDDSAKFDSNEEDSASVFSPSFGLKQTDKVP 871
Query: 362 SQEMQALK---NNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWITVSKGKDK 210
S+ + A K ++ T +PK++ + + A+++ + S P+ T KGK +
Sbjct: 872 SKTVAAKKGKPSSDTVPKPKRAPKQKKVVEAVNSDSDSEFGIPKKTTTPKGKGR 925
>U80737-1|AAB91436.1| 326|Homo sapiens CAGH16 protein.
Length = 326
Score = 32.3 bits (70), Expect = 2.0
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Frame = -2
Query: 509 TSGNRISIPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQ 330
T+G + P + + F + MG + + + +V M+ Q+ Q + Q
Sbjct: 97 TAGGAAVMRPMMQPQVSSQEGFLNAQMGAQRRRELLSHHFRQQRVAMMMQQQQQQQQQQQ 156
Query: 329 TQSQPKKSQRSTEAFPALSATAHSP----AAPPQWITVSK 222
Q Q ++ Q+ + SP APP W+ +
Sbjct: 157 QQQQQQQQQQQQQQQQQEQPQVFSPPPNVTAPPAWMAXGR 196
>AF171929-1|AAF03777.1| 820|Homo sapiens
metallaproteinase-disintegrin protein.
Length = 820
Score = 31.5 bits (68), Expect = 3.5
Identities = 21/79 (26%), Positives = 32/79 (40%)
Frame = -2
Query: 488 IPPQQKKPTLDDDDFPSLSMGRDDHPNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKK 309
+ P Q P + M HP + S QPP ++ SQ L +Q+Q
Sbjct: 745 VTPSQSHPRVMPSQSQPPVMPSQSHPQLTPSQSQPP---VMPSQSHPQLTPSQSQPPVTP 801
Query: 308 SQRSTEAFPALSATAHSPA 252
SQR + P+ S +P+
Sbjct: 802 SQRQPQLMPSQSQPPVTPS 820
>BX640905-1|CAE45950.1| 1706|Homo sapiens hypothetical protein
protein.
Length = 1706
Score = 31.1 bits (67), Expect = 4.6
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -2
Query: 575 KPSVSIQLHSQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSL-----SMGRDDH- 414
KP ++ HS +S S+ L + + S+ + PT DDD+F ++ G+ +
Sbjct: 1190 KPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYF 1249
Query: 413 -PNI-GASSVQPPKVTMINSQEMQALKNNQTQSQPKK 309
P I +V P +++ +N +N + Q +K
Sbjct: 1250 QPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRK 1286
>AY137776-1|AAN11306.1| 1706|Homo sapiens DNA strand-exchange protein
SEP1 protein.
Length = 1706
Score = 31.1 bits (67), Expect = 4.6
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -2
Query: 575 KPSVSIQLHSQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSL-----SMGRDDH- 414
KP ++ HS +S S+ L + + S+ + PT DDD+F ++ G+ +
Sbjct: 1190 KPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYF 1249
Query: 413 -PNI-GASSVQPPKVTMINSQEMQALKNNQTQSQPKK 309
P I +V P +++ +N +N + Q +K
Sbjct: 1250 QPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRK 1286
>AL133623-1|CAB63749.1| 1159|Homo sapiens hypothetical protein
protein.
Length = 1159
Score = 31.1 bits (67), Expect = 4.6
Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = -2
Query: 575 KPSVSIQLHSQPASXSNFRLTQTSGNRISIPPQQKKPTLDDDDFPSL-----SMGRDDH- 414
KP ++ HS +S S+ L + + S+ + PT DDD+F ++ G+ +
Sbjct: 655 KPQPAVHQHSSSSSVSSGHLGALNHSPQSLFVPTQVPTKDDDEFCNIWQSLQGSGKMQYF 714
Query: 413 -PNI-GASSVQPPKVTMINSQEMQALKNNQTQSQPKK 309
P I +V P +++ +N +N + Q +K
Sbjct: 715 QPTIQEKGAVLPQEISQVNQHHKSGFNDNSVKYQQRK 751
>DQ223931-1|ABB04281.1| 230|Homo sapiens protein phosphatase 1
regulatory subunit 8 testis splice variant protein.
Length = 230
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -2
Query: 413 PNIGASSVQPPKVTMINSQEMQALKNNQTQSQPKKSQRSTEAFPALSATAHSPAAPPQWI 234
P++ + V P V M N A+ N + ++PKK + + EA+P + S A W
Sbjct: 151 PDVDLTPVVPSAVNM-NPAPNPAVYNPEAVNEPKKKKYAKEAWPGCEFVSQSLIATAIWK 209
Query: 233 TVSKGK 216
+ K +
Sbjct: 210 CLLKAQ 215
>DQ096628-1|AAZ74794.1| 1835|Homo sapiens zipzap protein protein.
Length = 1835
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 413 PNIGASSVQPPKVTMINSQEMQALKNNQT-QSQ-PKKSQRSTEAFPALSATAHSPAAPPQ 240
PNI SS P V N+Q A+ ++ T QSQ P + + HSPA PPQ
Sbjct: 966 PNITPSS-SPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQ 1024
Query: 239 WITV 228
+ V
Sbjct: 1025 QVQV 1028
>AY727870-1|AAU20329.2| 1113|Homo sapiens ARID2 protein.
Length = 1113
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 413 PNIGASSVQPPKVTMINSQEMQALKNNQT-QSQ-PKKSQRSTEAFPALSATAHSPAAPPQ 240
PNI SS P V N+Q A+ ++ T QSQ P + + HSPA PPQ
Sbjct: 966 PNITPSS-SPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQ 1024
Query: 239 WITV 228
+ V
Sbjct: 1025 QVQV 1028
>AL832200-1|CAD91164.1| 1686|Homo sapiens hypothetical protein
protein.
Length = 1686
Score = 30.7 bits (66), Expect = 6.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 413 PNIGASSVQPPKVTMINSQEMQALKNNQT-QSQ-PKKSQRSTEAFPALSATAHSPAAPPQ 240
PNI SS P V N+Q A+ ++ T QSQ P + + HSPA PPQ
Sbjct: 817 PNITPSS-SPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQ 875
Query: 239 WITV 228
+ V
Sbjct: 876 QVQV 879
>AF521671-1|AAN03447.1| 2165|Homo sapiens SWI/SNF chromatin
remodeling complex subunit OSA2 protein.
Length = 2165
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = -2
Query: 485 PPQQKKPTLDDDDFPSLSM---GRDDHPNIGASSVQPPKVTM 369
PP KP +DD P + GR +HP +GA Q P V +
Sbjct: 105 PPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVAV 146
>BX537879-1|CAD97878.1| 1044|Homo sapiens hypothetical protein
protein.
Length = 1044
Score = 30.3 bits (65), Expect = 8.0
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -2
Query: 413 PNIGASSVQPPKVTMINSQEMQALKNNQT-QSQ-PKKSQRSTEAFPALSATAHSPAAPPQ 240
PNI SS P V N+Q A+ ++ T QSQ P + + HSPA PPQ
Sbjct: 175 PNITPSS-SPSPVPATNNQVPTAMPSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPAPPPQ 233
Query: 239 WITV 228
+ V
Sbjct: 234 QVQV 237
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,279,717
Number of Sequences: 237096
Number of extensions: 1740440
Number of successful extensions: 4265
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4261
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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