Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP04_T7_M12
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391... 37 0.018
09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957 36 0.055
02_05_1205 + 34939062-34939919 34 0.13
09_02_0533 - 10325681-10326211,10326260-10326328,10326758-103268... 33 0.39
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 32 0.68
03_05_0466 - 24602715-24603964,24605762-24605944,24606381-246072... 29 0.85
02_05_0108 + 25903545-25904292,25904888-25904989,25905220-25905263 31 0.89
01_01_0150 - 1344247-1345011 31 0.89
03_02_0827 + 11582974-11583027,11583210-11584358 31 1.2
09_03_0111 - 12440818-12441129,12441242-12441585,12441663-124419... 31 1.6
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 31 1.6
11_06_0629 + 25646268-25646591 30 2.1
04_04_0208 - 23605701-23607149 30 2.1
01_01_0153 - 1352982-1353731 30 2.7
10_08_0674 + 19788198-19789817 29 3.6
09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784 29 4.8
09_04_0472 - 17895285-17896459,17897113-17897271,17897374-178977... 29 4.8
07_03_0214 - 15250941-15251181,15251237-15251550 29 4.8
04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313 29 4.8
04_01_0377 - 4970034-4970687 29 4.8
02_04_0452 + 23044190-23045227 29 4.8
01_01_0491 + 3629025-3629051,3629679-3629778,3629947-3630015,363... 29 4.8
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732... 29 6.3
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 29 6.3
04_04_1523 - 34148407-34150224 29 6.3
04_03_0130 - 11622139-11623325,11626144-11627116 29 6.3
02_05_0446 - 29091389-29091559,29091722-29091774,29091945-290923... 29 6.3
02_02_0030 - 6207784-6208154,6208286-6211310 29 6.3
11_06_0368 + 22756988-22758205 28 8.3
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 28 8.3
06_03_0437 - 20765682-20765951,20766040-20766294,20766374-207665... 28 8.3
01_04_0008 + 15041682-15041909,15042035-15042319,15042406-150427... 28 8.3
>04_04_1120 +
31037811-31038813,31038903-31038991,31039094-31039163,
31039270-31039353,31039452-31039528,31039631-31039712,
31039847-31039929,31040270-31040333,31040435-31040566,
31040674-31040777,31040901-31040996,31041144-31041251
Length = 663
Score = 37.1 bits (82), Expect = 0.018
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = -3
Query: 570 MSNGTCAPVCRRACTNGACSEPD--KCTCDDGYRLSPEDPFVCLPV--CSER--CVNSHC 409
M+NG C R T ACS+ D C C G++ D C V CSE+ C HC
Sbjct: 477 MNNGGCWKGTRDGKTFSACSDSDLSGCKCPPGFK---GDGLHCEDVDECSEKLACSCPHC 533
Query: 408 SSPNTCTCFKDYERNDTNSNVCYKKCDGAC 319
S NT + ++ + +N+ Y K + C
Sbjct: 534 SCKNT---WGSFDCSCHGNNLMYIKAEDTC 560
>09_04_0477 - 17932797-17933974,17934454-17934612,17934693-17934957
Length = 533
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/64 (35%), Positives = 26/64 (40%)
Frame = -3
Query: 429 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 250
RC SH N + N+ NV Y C G C N S C C G + NGT
Sbjct: 70 RCNCSHGYEGNPYIKDGCEDINECLDNVTYP-CPGICNNTMGSF--TCSCHQGNYMENGT 126
Query: 249 CIRN 238
CI N
Sbjct: 127 CIPN 130
>02_05_1205 + 34939062-34939919
Length = 285
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/79 (32%), Positives = 34/79 (43%)
Frame = +1
Query: 301 RAPAIFASSIAFLVTNVRIRIVTLVVFEARARIRG*TVRVHAALRTDRQADERILGTQXV 480
RAP F VT + +V+ V A + RG T R AAL+ R R G V
Sbjct: 102 RAPRRFGGDAVLGVTRI---VVSTFVGSASSSARGTTGRQVAALQLRRPRSLRPQGIVNV 158
Query: 481 AIVARALIGLRARPICAGP 537
A+ RA P+C+ P
Sbjct: 159 AVAVLDATDARAVPLCSSP 177
>09_02_0533 -
10325681-10326211,10326260-10326328,10326758-10326855,
10326968-10327117,10327848-10327976,10328063-10328999
Length = 637
Score = 32.7 bits (71), Expect = 0.39
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
Frame = -3
Query: 552 APVCRRACTNGACSEPD---KCTCDDGYRLSP------EDPFVCLPVCSERCVNSHCSSP 400
AP C A N C D KC C DGY+ +P D C C + ++P
Sbjct: 276 APDCLSA--NSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECKSPQDYSCYGNCNNTP 333
Query: 399 NT--CTCFKDYERNDTNSNVC 343
+ C C + YERN + N C
Sbjct: 334 GSHICDCPRGYERNASTPNGC 354
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 31.9 bits (69), Expect = 0.68
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -3
Query: 345 CYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTA-CSANCSAGG 202
C KC G +G C +G CEC+SG+ T I +TA C CS G
Sbjct: 568 CPAKCTG---HGICKANGICECESGW-----TGIDCSTAVCDEQCSLHG 608
>03_05_0466 -
24602715-24603964,24605762-24605944,24606381-24607286,
24609446-24609516,24609737-24609846,24610073-24610108,
24610211-24610278,24610655-24610760,24610850-24610997,
24611091-24611218,24611319-24611454,24611924-24612072
Length = 1096
Score = 29.5 bits (63), Expect(2) = 0.85
Identities = 21/91 (23%), Positives = 31/91 (34%)
Frame = -3
Query: 435 SERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSN 256
+ CVNS +C+C + YE N N C + + C G ++
Sbjct: 588 NSHCVNSSNGMGYSCSCNQGYEGNPYLDNGCQDIDECTLRRQGRQYEDVYPCKHGICINT 647
Query: 255 GTCIRNNTACSANCSAGGEGVRARQRLPVGA 163
R C A G +Q LP+ A
Sbjct: 648 PGSYR--CKCKAGTKPDGTNFGCQQVLPMAA 676
Score = 20.6 bits (41), Expect(2) = 0.85
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -3
Query: 156 LPRRSYFRRAGGL 118
+ ++ YFRR GGL
Sbjct: 707 IEKQEYFRRNGGL 719
>02_05_0108 + 25903545-25904292,25904888-25904989,25905220-25905263
Length = 297
Score = 31.5 bits (68), Expect = 0.89
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 14/103 (13%)
Frame = -3
Query: 474 LSPEDPFVCLPVCSER----CVNSHCSSPNTCTCFKDYERND----TNSNVCYKKC---- 331
LSP D C+ R C N++ +S C+ Y+ D ++ Y+KC
Sbjct: 101 LSPGDCVACVRQTVARLGAVCANAYAASLQVDGCYVRYDAADFIGRADTTTAYRKCSSST 160
Query: 330 --DGACENGRCSLDGACECDSGYILSNGTCIRNNTACSANCSA 208
DGA + R + G + +GY LS ++ C + A
Sbjct: 161 SRDGAFLSSRDGVLGELQAAAGYKLSTSGTVQGVAQCLGDVPA 203
>01_01_0150 - 1344247-1345011
Length = 254
Score = 31.5 bits (68), Expect = 0.89
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = -3
Query: 594 PLSRQFTPMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNS 415
P R + G C C+ AC P CDD Y + PF + C N+
Sbjct: 138 PFWRCDDELKPGQCFAACK-ACREAPGPFPGPLICDDVYWGADPGPFCTPRPWGDCCDNT 196
Query: 414 HC--SSPNTCTC 385
C S P C+C
Sbjct: 197 TCTKSIPPICSC 208
>03_02_0827 + 11582974-11583027,11583210-11584358
Length = 400
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 209 RAGKECGLGSGCPSEQTHFPAEV 141
RAGK G G GC ++Q H PA+V
Sbjct: 142 RAGKHGGGGGGCGAQQHHSPAQV 164
>09_03_0111 -
12440818-12441129,12441242-12441585,12441663-12441989,
12443444-12443602,12443687-12443784,12444745-12444821
Length = 438
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = -3
Query: 429 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 250
RC SH N + N+ N Y C G C+N S D C C G + NG
Sbjct: 40 RCKCSHGYEGNPYIKDGCKDINECLDNATYP-CMGICKNTIGSFD--CSCYPGSYMKNGF 96
Query: 249 CIRN 238
C+ N
Sbjct: 97 CLPN 100
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 30.7 bits (66), Expect = 1.6
Identities = 29/115 (25%), Positives = 41/115 (35%), Gaps = 5/115 (4%)
Frame = -3
Query: 525 NGACSEPD--KCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNS 352
NG ++ D +C C DGY +P C + C SP+ C+ D +
Sbjct: 194 NGTTADYDGYRCYCSDGYEGNPYVDGGCRDI-------DECKSPHIYPCYGDCKNTRGGY 246
Query: 351 NV-CYK--KCDGACENGRCSLDGACECDSGYILSNGTCIRNNTACSANCSAGGEG 196
+ C+ K + + NG C C Y G CI A C G G
Sbjct: 247 DCQCHHGYKGNASILNG-CQDINECAEPEKYSCYGGLCINTPGAFVCRCHDGSYG 300
>11_06_0629 + 25646268-25646591
Length = 107
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 411 SESSRSAQNRPAGRRKDPRDSXGSHRRTCTYRAPSTPHLCRPDGTQGR 554
+ESSR RP + R GSHR +R P L R +G +GR
Sbjct: 44 TESSRGRHRRPICGGRKARGGGGSHR----HRLLHPPDLAREEGEKGR 87
>04_04_0208 - 23605701-23607149
Length = 482
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 121 PASPAEVTSAGKWVCSDGQPLPSPHSFPARAAVRGARCIISYARSIGQYVSGVAL 285
PASPA + + +C LP+ F A + G RC+ S S G V +AL
Sbjct: 43 PASPALLVLSDARMCPSAASLPTRRCFDLAAILTGGRCVGS---SNGWLVLSIAL 94
>01_01_0153 - 1352982-1353731
Length = 249
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 2/85 (2%)
Frame = -3
Query: 624 RRVXGSPMDCPLSRQFTPMSNGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCL 445
+R+ P D P R + C C+ +C P K C+D Y + PF
Sbjct: 125 KRLPTKP-DPPQWRCNDELEPSQCTAACK-SCREAPGPFPGKLICEDIYWGADPGPFCTP 182
Query: 444 PVCSERCVNSHCS--SPNTCTCFKD 376
+ C + C+ +P TC C +
Sbjct: 183 RPWGDCCDKAFCNKMNPPTCRCMDE 207
>10_08_0674 + 19788198-19789817
Length = 539
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 111 DLQARQPCGSNFGGE-VGLLRRATAAEPALLPRPRCSS 221
D Q PCG N GG+ V ++ T+A P L RP+ S+
Sbjct: 7 DRQLLPPCGCNGGGDVVVVVVPKTSAAPVLEDRPKTSA 44
>09_04_0473 - 17906802-17907964,17908175-17908871,17910323-17910784
Length = 773
Score = 29.1 bits (62), Expect = 4.8
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 10/123 (8%)
Frame = -3
Query: 531 CTNGACSEPDKCTCDDGYRLSP------EDPF----VCLPVCSERCVNSHCSSPNTCTCF 382
C + +C C DGY+ +P E PF + LP+ +RC S F
Sbjct: 280 CVDATNGRGYRCKCSDGYKGNPYITDGCEGPFPAILIPLPLQIKRCRKS--------IIF 331
Query: 381 KDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGTCIRNNTACSANCSAGG 202
D + C G C N + S C C G L +G C +++++ G
Sbjct: 332 LSLFLADIDECQDAHPCTGICINTQGSY--TCTCQRGKHLIDGVCKQSSSSWIIPVIGGS 389
Query: 201 EGV 193
GV
Sbjct: 390 IGV 392
>09_04_0472 -
17895285-17896459,17897113-17897271,17897374-17897794,
17898520-17898552,17898902-17899384
Length = 756
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/64 (29%), Positives = 27/64 (42%)
Frame = -3
Query: 429 RCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACENGRCSLDGACECDSGYILSNGT 250
+C + + +P KD N+ N Y C G C+N + C C G + NG
Sbjct: 296 KCSDGYEGNPYVKDGCKDI--NECLDNATYP-CPGICKNTLGNF--TCSCYPGNYMMNGI 350
Query: 249 CIRN 238
CI N
Sbjct: 351 CIPN 354
>07_03_0214 - 15250941-15251181,15251237-15251550
Length = 184
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -3
Query: 261 SNGTCIRNNTACSANCSAGGEGVRARQRLPVG 166
+ G C+R A AN GG G R LPVG
Sbjct: 112 ARGKCVRCQQATGANEETGGRGGDNRSWLPVG 143
>04_03_0602 - 17884667-17885817,17885946-17886113,17886413-17887313
Length = 739
Score = 29.1 bits (62), Expect = 4.8
Identities = 28/100 (28%), Positives = 39/100 (39%)
Frame = -3
Query: 495 TCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGACE 316
+C++ ++ D + C SE C NS TC C K YE N Y + C
Sbjct: 250 SCEEAWKKM--DSYACKSTNSE-CFNSTNGPGYTCNCSKGYEGNP------YLEGPNGCR 300
Query: 315 NGRCSLDGACECDSGYILSNGTCIRNNTACSANCSAGGEG 196
+ +D C+ DS G C NC AG +G
Sbjct: 301 D----ID-ECQ-DSKTHHCYGECRNKPGGFDCNCPAGSKG 334
>04_01_0377 - 4970034-4970687
Length = 217
Score = 29.1 bits (62), Expect = 4.8
Identities = 28/116 (24%), Positives = 36/116 (31%), Gaps = 2/116 (1%)
Frame = -3
Query: 543 CRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERN 364
C C NG C KC + L P N CS C ++ N
Sbjct: 92 CGSGCQNGPCRADIKCGRNANGELCPN--------------NMCCSQWGYCGLGSEFCGN 137
Query: 363 DTNSNVCYKKCDGACENGRCSLD-GACECDSGYILS-NGTCIRNNTACSANCSAGG 202
S C C RC G +C + + S G C C + C +GG
Sbjct: 138 GCQSGAC-------CPEKRCGKQAGGDKCPNNFCCSAGGYCGLGGNYCGSGCQSGG 186
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 227 HAVLFLMHVPLDSMYPESHSHAPSKEHRPFSQAPS 331
H L L H + SHSH+ S+ H P ++ P+
Sbjct: 166 HGCLLLHHAGHGHGHAHSHSHSHSRAHNPSTRPPT 200
>01_01_0491 +
3629025-3629051,3629679-3629778,3629947-3630015,
3630282-3630559
Length = 157
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 432 ERCVNSHCSSPNTCTCFKDYER 367
ERC++S S C CFK +R
Sbjct: 17 ERCISSQAESDGYCACFKGLQR 38
>12_02_0450 +
19172812-19172920,19173020-19173088,19173168-19173274,
19173874-19174365
Length = 258
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 162 LLRRATAAEPALLPRPRCSSRSTLY 236
LL+RAT++ PAL RC S S L+
Sbjct: 10 LLKRATSSSPALYQSIRCMSSSKLF 34
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +2
Query: 686 GVAPCIGPSPXXPXRXXXAARTRGGPXXG 772
G APC+ P P P AA GP G
Sbjct: 396 GKAPCLEPPPTPPRAMAAAAAAEAGPSRG 424
>04_04_1523 - 34148407-34150224
Length = 605
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 423 VNSHCSSPNTCTCFKDYERNDTNSNVCYKKCDGAC 319
+N CS+P C KD+E D + V C +C
Sbjct: 97 INRSCSTPCLCPVSKDFEHKDRSGLVEMLGCSISC 131
>04_03_0130 - 11622139-11623325,11626144-11627116
Length = 719
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Frame = -3
Query: 498 CTCDDGYR----LSPEDPFVCLPVCSERCV 421
C C G+R L PEDP C +CS V
Sbjct: 303 CNCSKGFRGNPYLHPEDPSSCQGICSSTVV 332
>02_05_0446 -
29091389-29091559,29091722-29091774,29091945-29092373,
29093411-29094191
Length = 477
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -3
Query: 243 RNNTACSANCSAGGEGVRARQRLPVGANPLPRRSYFRRA 127
R N S G G R +LP+ PLP +Y +R+
Sbjct: 424 RGNNEISERRDRSGSGARLGLQLPLAQQPLPGPTYLQRS 462
>02_02_0030 - 6207784-6208154,6208286-6211310
Length = 1131
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -3
Query: 528 TNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSE 430
+NG + D YRL DP LP+C E
Sbjct: 725 SNGVFGNASRAILDGNYRLCVNDPGYSLPLCRE 757
>11_06_0368 + 22756988-22758205
Length = 405
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -3
Query: 513 SEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSH-CSSP 400
S P++ Y P DP C CS CV H C SP
Sbjct: 35 SAPERDQTAAPYGTVPPDPLSCATDCSPDCVFYHLCPSP 73
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 28.3 bits (60), Expect = 8.3
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 10/95 (10%)
Frame = -3
Query: 522 GACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCVNSHCSSPNTCTCFKDYERND------ 361
G S C + P + + C+ SE CVNS C C K YE N
Sbjct: 252 GNSSASSSCPAPEVREKMPPE-YACVSDNSE-CVNSTNGPGYYCKCSKGYEGNPYLVGGC 309
Query: 360 TNSNVCYKK----CDGACENGRCSLDGACECDSGY 268
+ + C + C G C N D C+C +GY
Sbjct: 310 NDIDECARSDEYPCHGDCRN--TVGDYHCKCRTGY 342
>06_03_0437 - 20765682-20765951,20766040-20766294,20766374-20766545,
20766964-20767097,20767205-20767288,20767369-20767659,
20767867-20768214,20768321-20768496,20768579-20768695,
20768780-20768936,20769110-20769225,20769323-20769483,
20769567-20769883,20769969-20770250,20770347-20770648,
20771977-20772067,20773203-20773256,20773723-20773812
Length = 1138
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 198 LPRPRCSSRSTLYYFLCTFHWTV 266
+PRPR YY+LC WTV
Sbjct: 1046 IPRPRIPKWWIWYYWLCPLAWTV 1068
>01_04_0008 +
15041682-15041909,15042035-15042319,15042406-15042723,
15044087-15044128,15045111-15045391,15045808-15045883,
15046196-15046296,15047971-15048088,15048872-15049186
Length = 587
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -3
Query: 192 RARQRLPVGANPLPRRSYFRRAGGLADQLAAGRXPW 85
R R R +G P PR+ A A+QLAAG PW
Sbjct: 17 RGRPRRRLGRKPGPRQGCVP-APAAAEQLAAGWPPW 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,053,747
Number of Sequences: 37544
Number of extensions: 537866
Number of successful extensions: 1870
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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