Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP04_T7_M08
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   184   9e-47
U80836-6|AAB37894.2|  259|Caenorhabditis elegans Hypothetical pr...    29   2.9  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  184 bits (447), Expect = 9e-47
 Identities = 102/220 (46%), Positives = 127/220 (57%)
 Frame = -1

Query: 784 EVRDKLLENQSXXXXXXXXXXPLSVVIPAHNTGXGPEKTSFFQALXIPTKISKVLLKSST 605
           E+R KLLEN+           P  V +P  NTG GPEKTSFFQAL IPTKI++  ++   
Sbjct: 97  EIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILN 156

Query: 604 MYTS*SPVTKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQ 425
                    KVGASE+ LLNML ++PFSYGLVV+QVYD GT++ PE+LD+  E+LR +F 
Sbjct: 157 DVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFL 216

Query: 424 AGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFX 245
           +GV NVA++SLA+ YPT+AS  HS+ANG +N+L               IK FI DPSKF 
Sbjct: 217 SGVRNVASVSLAVNYPTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF- 275

Query: 244 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 125
                                        SDDDMGFGLFD
Sbjct: 276 ---AAAAPAAAAAPAAAAPAAKKEEPKEESDDDMGFGLFD 312


>U80836-6|AAB37894.2|  259|Caenorhabditis elegans Hypothetical
           protein B0432.8 protein.
          Length = 259

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 582 TGLQDVYIVDDFNSTFEILVGIXRAWKKXVFSG 680
           TG+Q +    +F S FE  +GI + W   V++G
Sbjct: 27  TGIQKMINFPEFESQFEKSIGISKKWPGSVYTG 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,869,742
Number of Sequences: 27780
Number of extensions: 279213
Number of successful extensions: 664
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)